Genome Details
Selected Rep_genome_ID: HRGMv2_0353
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-1031
Species
CAG-1031 sp900752535
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0353 | 2,667,210 | 99.81% | 0.377% | UK | Europe | HRGM |
| Rep_380 | 2,580,519 | 99.434% | 0.377358% | NA | NA | WIS |
| SW053_maxbin.010 | 2,692,410 | 95.66% | 0.38% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0353_CGC8 | CGCFAM_00001 | Yes | 12 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0353_CGC7 | CGCFAM_00043 | Yes | 5 | 2 | alpha-glucan |
| HRGMv2_0353_CGC20 | CGCFAM_00062 | Yes | 7 | 2 | beta-glucan |
| HRGMv2_0353_CGC14 | CGCFAM_00118 | Yes | 5 | 1 | |
| HRGMv2_0353_CGC22 | CGCFAM_00145 | Yes | 10 | 3 | |
| HRGMv2_0353_CGC31 | CGCFAM_00368 | Yes | 5 | 1 | |
| HRGMv2_0353_CGC26 | CGCFAM_00476 | Yes | 9 | 1 | |
| HRGMv2_0353_CGC25 | CGCFAM_00844 | Yes | 4 | 1 | |
| HRGMv2_0353_CGC34 | CGCFAM_01345 | Yes | 3 | 1 | |
| HRGMv2_0353_CGC30 | CGCFAM_01665 | Yes | 3 | 1 | |
| HRGMv2_0353_CGC10 | CGCFAM_02835 | Yes | 3 | 1 | |
| HRGMv2_0353_CGC27 | CGCFAM_03369 | Yes | 3 | 1 | |
| HRGMv2_0353_CGC11 | CGCFAM_09629 | Yes | 4 | 1 | |
| HRGMv2_0353_CGC15 | CGCFAM_09630 | Yes | 3 | 1 |
Top CAZyme Families