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Cluster: HRGMv2_0353_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0353_10 HRGMv2_0353_10_8 5228 6847 + 2.A.3.7.1
peptidase HRGMv2_0353_10 HRGMv2_0353_10_9 8351 10729 - C10.UPW
CAZyme HRGMv2_0353_10 HRGMv2_0353_10_10 10966 12381 - GH128
CAZyme HRGMv2_0353_10 HRGMv2_0353_10_11 12418 14640 - GH3
CAZyme HRGMv2_0353_10 HRGMv2_0353_10_12 14720 15823 - GH16_3
NULL(UNKNOWN) HRGMv2_0353_10 HRGMv2_0353_10_13 16046 16882 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0353_10 HRGMv2_0353_10_14 17150 18742 - 8.A.46.1.5
TC HRGMv2_0353_10 HRGMv2_0353_10_15 18764 21898 - 1.B.14.6.1
TF HRGMv2_0353_10 HRGMv2_0353_10_16 22333 25191 + GerE
TC HRGMv2_0353_10 HRGMv2_0353_10_17 25188 25829 + 2.A.115.2.14
Gene ID: HRGMv2_0353_10_8
Type: TC
Location: 5228 - 6847 (+)
Gene ID: HRGMv2_0353_10_9
Type: peptidase
Location: 8351 - 10729 (-)
Gene ID: HRGMv2_0353_10_10
Type: CAZyme
Location: 10966 - 12381 (-)
Gene ID: HRGMv2_0353_10_11
Type: CAZyme
Location: 12418 - 14640 (-)
Gene ID: HRGMv2_0353_10_12
Type: CAZyme
Location: 14720 - 15823 (-)
Gene ID: HRGMv2_0353_10_13
Type:
Location: 16046 - 16882 (-)
Gene ID: HRGMv2_0353_10_14
Type: TC
Location: 17150 - 18742 (-)
Gene ID: HRGMv2_0353_10_15
Type: TC
Location: 18764 - 21898 (-)
Gene ID: HRGMv2_0353_10_16
Type: TF
Location: 22333 - 25191 (+)
Gene ID: HRGMv2_0353_10_17
Type: TC
Location: 25188 - 25829 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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