Cluster: HRGMv2_0353_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0353
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0353_2 | HRGMv2_0353_2_60 | 78691 | 79965 | + | GH53 |
| TC | HRGMv2_0353_2 | HRGMv2_0353_2_61 | 80187 | 81383 | + | 1.B.6.1.2 |
| NULL(UNKNOWN) | HRGMv2_0353_2 | HRGMv2_0353_2_62 | 81961 | 84885 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0353_2 | HRGMv2_0353_2_63 | 85051 | 88983 | - | GH87 |
| pfam | HRGMv2_0353_2 | HRGMv2_0353_2_64 | 89088 | 90779 | - | DUF6377 |
| NULL(UNKNOWN) | HRGMv2_0353_2 | HRGMv2_0353_2_65 | 90864 | 91367 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0353_2 | HRGMv2_0353_2_66 | 91389 | 92840 | - | GH87 |
| NULL(UNKNOWN) | HRGMv2_0353_2 | HRGMv2_0353_2_67 | 93261 | 94175 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0353_2 | HRGMv2_0353_2_68 | 94506 | 97628 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0353_2 | HRGMv2_0353_2_69 | 97658 | 99514 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0353_2 | HRGMv2_0353_2_70 | 99539 | 101614 | + | GH97 |
| TC | HRGMv2_0353_2 | HRGMv2_0353_2_71 | 101897 | 102631 | - | 1.A.14.2.2 |
Gene ID: HRGMv2_0353_2_60
Type: CAZyme
Location: 78691 - 79965 (+)
Type: CAZyme
Location: 78691 - 79965 (+)
Gene ID: HRGMv2_0353_2_61
Type: TC
Location: 80187 - 81383 (+)
Type: TC
Location: 80187 - 81383 (+)
Gene ID: HRGMv2_0353_2_62
Type:
Location: 81961 - 84885 (-)
Type:
Location: 81961 - 84885 (-)
Gene ID: HRGMv2_0353_2_63
Type: CAZyme
Location: 85051 - 88983 (-)
Type: CAZyme
Location: 85051 - 88983 (-)
Gene ID: HRGMv2_0353_2_64
Type: pfam
Location: 89088 - 90779 (-)
Type: pfam
Location: 89088 - 90779 (-)
Gene ID: HRGMv2_0353_2_65
Type:
Location: 90864 - 91367 (-)
Type:
Location: 90864 - 91367 (-)
Gene ID: HRGMv2_0353_2_66
Type: CAZyme
Location: 91389 - 92840 (-)
Type: CAZyme
Location: 91389 - 92840 (-)
Gene ID: HRGMv2_0353_2_67
Type:
Location: 93261 - 94175 (+)
Type:
Location: 93261 - 94175 (+)
Gene ID: HRGMv2_0353_2_68
Type: TC
Location: 94506 - 97628 (+)
Type: TC
Location: 94506 - 97628 (+)
Gene ID: HRGMv2_0353_2_69
Type: pfam
Location: 97658 - 99514 (+)
Type: pfam
Location: 97658 - 99514 (+)
Gene ID: HRGMv2_0353_2_70
Type: CAZyme
Location: 99539 - 101614 (+)
Type: CAZyme
Location: 99539 - 101614 (+)
Gene ID: HRGMv2_0353_2_71
Type: TC
Location: 101897 - 102631 (-)
Type: TC
Location: 101897 - 102631 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-1031
Species
CAG-1031 sp900752535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.