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Cluster: HRGMv2_0353_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0353_8 HRGMv2_0353_8_75 93208 94587 - 2.A.66.1.32
pfam HRGMv2_0353_8 HRGMv2_0353_8_76 94954 96666 + DUF6377
TC HRGMv2_0353_8 HRGMv2_0353_8_77 96862 99834 + 1.B.14.6.1
pfam HRGMv2_0353_8 HRGMv2_0353_8_78 99859 101391 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0353_8 HRGMv2_0353_8_79 101413 102906 + GH30_3
pfam HRGMv2_0353_8 HRGMv2_0353_8_80 102921 104951 + DUF5016 | DUF5125 | DUF5125 | DUF5121 | DUF5121
CAZyme HRGMv2_0353_8 HRGMv2_0353_8_81 105091 107334 + GH3
Gene ID: HRGMv2_0353_8_75
Type: TC
Location: 93208 - 94587 (-)
Gene ID: HRGMv2_0353_8_76
Type: pfam
Location: 94954 - 96666 (+)
Gene ID: HRGMv2_0353_8_77
Type: TC
Location: 96862 - 99834 (+)
Gene ID: HRGMv2_0353_8_78
Type: pfam
Location: 99859 - 101391 (+)
Gene ID: HRGMv2_0353_8_79
Type: CAZyme
Location: 101413 - 102906 (+)
Gene ID: HRGMv2_0353_8_80
Type: pfam
Location: 102921 - 104951 (+)
Gene ID: HRGMv2_0353_8_81
Type: CAZyme
Location: 105091 - 107334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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