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Cluster: HRGMv2_0353_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0353_12 HRGMv2_0353_12_47 47104 49116 - GH13_14
NULL(UNKNOWN) HRGMv2_0353_12 HRGMv2_0353_12_48 49286 49588 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0353_12 HRGMv2_0353_12_49 49787 51088 - 3.D.5.1.1
TC HRGMv2_0353_12 HRGMv2_0353_12_50 51099 51716 - 3.D.5.1.1
TC HRGMv2_0353_12 HRGMv2_0353_12_51 51741 52367 - 3.D.5.1.1
pfam HRGMv2_0353_12 HRGMv2_0353_12_52 52370 53089 - FMN_bind
TC HRGMv2_0353_12 HRGMv2_0353_12_53 53086 54306 - 3.D.5.1.1
TC HRGMv2_0353_12 HRGMv2_0353_12_54 54351 55697 - 3.D.5.1.1
TC HRGMv2_0353_12 HRGMv2_0353_12_55 56076 56903 + 1.A.30.3.1
Gene ID: HRGMv2_0353_12_47
Type: CAZyme
Location: 47104 - 49116 (-)
Gene ID: HRGMv2_0353_12_48
Type:
Location: 49286 - 49588 (-)
Gene ID: HRGMv2_0353_12_49
Type: TC
Location: 49787 - 51088 (-)
Gene ID: HRGMv2_0353_12_50
Type: TC
Location: 51099 - 51716 (-)
Gene ID: HRGMv2_0353_12_51
Type: TC
Location: 51741 - 52367 (-)
Gene ID: HRGMv2_0353_12_52
Type: pfam
Location: 52370 - 53089 (-)
Gene ID: HRGMv2_0353_12_53
Type: TC
Location: 53086 - 54306 (-)
Gene ID: HRGMv2_0353_12_54
Type: TC
Location: 54351 - 55697 (-)
Gene ID: HRGMv2_0353_12_55
Type: TC
Location: 56076 - 56903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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