Genome Details
Selected Rep_genome_ID: HRGMv2_0335
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp944322325
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0335 | 2,460,600 | 95.29% | 0.57% | US | North America | HRGM |
| Rep_133 | 3,058,856 | 96.014% | 4.33395% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0335_CGC1 | CGCFAM_00229 | Yes | 7 | 1 | |
| HRGMv2_0335_CGC28 | CGCFAM_00341 | Yes | 5 | 3 | |
| HRGMv2_0335_CGC10 | CGCFAM_00352 | Yes | 5 | 1 | |
| HRGMv2_0335_CGC30 | CGCFAM_00602 | Yes | 5 | 1 | |
| HRGMv2_0335_CGC8 | CGCFAM_00713 | Yes | 3 | 1 | |
| HRGMv2_0335_CGC14 | CGCFAM_01607 | Yes | 5 | 2 | |
| HRGMv2_0335_CGC24 | CGCFAM_01892 | Yes | 7 | 2 | |
| HRGMv2_0335_CGC21 | CGCFAM_02390 | Yes | 4 | 2 | |
| HRGMv2_0335_CGC9 | CGCFAM_02610 | Yes | 5 | 1 | |
| HRGMv2_0335_CGC26 | CGCFAM_02782 | Yes | 3 | 1 | |
| HRGMv2_0335_CGC34 | CGCFAM_05438 | Yes | 3 | 2 | |
| HRGMv2_0335_CGC35 | CGCFAM_05850 | Yes | 4 | 2 | |
| HRGMv2_0335_CGC13 | CGCFAM_05987 | Yes | 3 | 1 | |
| HRGMv2_0335_CGC5 | CGCFAM_06939 | Yes | 7 | 2 | |
| HRGMv2_0335_CGC20 | CGCFAM_08791 | Yes | 9 | 2 |
Top CAZyme Families