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Cluster: HRGMv2_0335_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0335_1 HRGMv2_0335_1_24 22933 24054 - 9.B.146.1.4
TF HRGMv2_0335_1 HRGMv2_0335_1_25 24167 24871 - Fe_dep_repress
pfam HRGMv2_0335_1 HRGMv2_0335_1_26 24864 25901 - ApbE
TC HRGMv2_0335_1 HRGMv2_0335_1_27 25898 26470 - 2.A.107.1.2
pfam HRGMv2_0335_1 HRGMv2_0335_1_28 26467 27207 - DUF6048
pfam HRGMv2_0335_1 HRGMv2_0335_1_29 27167 27664 - DUF6452
CAZyme HRGMv2_0335_1 HRGMv2_0335_1_30 27666 28619 - GT2
Gene ID: HRGMv2_0335_1_24
Type: TC
Location: 22933 - 24054 (-)
Gene ID: HRGMv2_0335_1_25
Type: TF
Location: 24167 - 24871 (-)
Gene ID: HRGMv2_0335_1_26
Type: pfam
Location: 24864 - 25901 (-)
Gene ID: HRGMv2_0335_1_27
Type: TC
Location: 25898 - 26470 (-)
Gene ID: HRGMv2_0335_1_28
Type: pfam
Location: 26467 - 27207 (-)
Gene ID: HRGMv2_0335_1_29
Type: pfam
Location: 27167 - 27664 (-)
Gene ID: HRGMv2_0335_1_30
Type: CAZyme
Location: 27666 - 28619 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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