dbCAN Logo

Cluster: HRGMv2_0335_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0335_2 HRGMv2_0335_2_85 101957 103576 - 3.A.1.121.4
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_86 103878 107732 + GT2
TC HRGMv2_0335_2 HRGMv2_0335_2_87 107729 109000 + 2.A.1.25.5
pfam HRGMv2_0335_2 HRGMv2_0335_2_88 109068 110108 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
pfam HRGMv2_0335_2 HRGMv2_0335_2_89 110214 111392 + Orn_DAP_Arg_deC
TC HRGMv2_0335_2 HRGMv2_0335_2_90 111425 113392 + 2.A.67.4.2
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_91 113575 114564 + GH109
Gene ID: HRGMv2_0335_2_85
Type: TC
Location: 101957 - 103576 (-)
Gene ID: HRGMv2_0335_2_86
Type: CAZyme
Location: 103878 - 107732 (+)
Gene ID: HRGMv2_0335_2_87
Type: TC
Location: 107729 - 109000 (+)
Gene ID: HRGMv2_0335_2_88
Type: pfam
Location: 109068 - 110108 (+)
Gene ID: HRGMv2_0335_2_89
Type: pfam
Location: 110214 - 111392 (+)
Gene ID: HRGMv2_0335_2_90
Type: TC
Location: 111425 - 113392 (+)
Gene ID: HRGMv2_0335_2_91
Type: CAZyme
Location: 113575 - 114564 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List