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Cluster: HRGMv2_0335_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0335_14 HRGMv2_0335_14_9 12510 13493 - GT2
pfam HRGMv2_0335_14 HRGMv2_0335_14_10 13490 14992 - Polysacc_synt | Polysacc_synt_3
TC HRGMv2_0335_14 HRGMv2_0335_14_11 15013 17592 - 9.B.144.1.4
pfam HRGMv2_0335_14 HRGMv2_0335_14_12 17689 19107 - AdoHcyase_NAD | AdoHcyase | KARI_N
pfam HRGMv2_0335_14 HRGMv2_0335_14_13 19367 20725 - MatE | MatE
TC HRGMv2_0335_14 HRGMv2_0335_14_14 20916 22637 + 2.A.81.1.2
pfam HRGMv2_0335_14 HRGMv2_0335_14_15 22733 23428 - IspD | NTP_transf_3
pfam HRGMv2_0335_14 HRGMv2_0335_14_16 23446 25749 - S1 | RNB | OB_RNB | OB_Dis3 | CSD2
CAZyme HRGMv2_0335_14 HRGMv2_0335_14_17 25869 27083 - GT30
Gene ID: HRGMv2_0335_14_9
Type: CAZyme
Location: 12510 - 13493 (-)
Gene ID: HRGMv2_0335_14_10
Type: pfam
Location: 13490 - 14992 (-)
Gene ID: HRGMv2_0335_14_11
Type: TC
Location: 15013 - 17592 (-)
Gene ID: HRGMv2_0335_14_12
Type: pfam
Location: 17689 - 19107 (-)
Gene ID: HRGMv2_0335_14_13
Type: pfam
Location: 19367 - 20725 (-)
Gene ID: HRGMv2_0335_14_14
Type: TC
Location: 20916 - 22637 (+)
Gene ID: HRGMv2_0335_14_15
Type: pfam
Location: 22733 - 23428 (-)
Gene ID: HRGMv2_0335_14_16
Type: pfam
Location: 23446 - 25749 (-)
Gene ID: HRGMv2_0335_14_17
Type: CAZyme
Location: 25869 - 27083 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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