Genome Details
Selected Rep_genome_ID: HRGMv2_0321
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella timonensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR037450 | 2,731,278 | 96.93% | 0% | China | Asia | CGMR |
| HRGMv2_0321 | 2,673,310 | 98.12% | 0.089% | South Korea | Asia | HRGM |
| MGYG000003794 | 2,491,297 | 95.18% | 0.02% | Canada | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0321_CGC3 | CGCFAM_00034 | Yes | 7 | 6 | |
| HRGMv2_0321_CGC9 | CGCFAM_00048 | Yes | 8 | 2 | |
| HRGMv2_0321_CGC15 | CGCFAM_00152 | Yes | 7 | 2 | |
| HRGMv2_0321_CGC18 | CGCFAM_00178 | Yes | 4 | 1 | |
| HRGMv2_0321_CGC1 | CGCFAM_00180 | Yes | 8 | 5 | |
| HRGMv2_0321_CGC12 | CGCFAM_00181 | Yes | 6 | 1 | |
| HRGMv2_0321_CGC16 | CGCFAM_00254 | Yes | 4 | 1 | |
| HRGMv2_0321_CGC13 | CGCFAM_00376 | Yes | 5 | 2 | host glycan |
| HRGMv2_0321_CGC22 | CGCFAM_00468 | Yes | 4 | 1 | |
| HRGMv2_0321_CGC20 | CGCFAM_00603 | Yes | 8 | 3 | |
| HRGMv2_0321_CGC5 | CGCFAM_00648 | Yes | 6 | 1 | |
| HRGMv2_0321_CGC10 | CGCFAM_00690 | Yes | 3 | 1 | |
| HRGMv2_0321_CGC28 | CGCFAM_01892 | Yes | 4 | 1 | |
| HRGMv2_0321_CGC25 | CGCFAM_01952 | Yes | 7 | 4 | |
| HRGMv2_0321_CGC17 | CGCFAM_02870 | Yes | 3 | 1 | |
| HRGMv2_0321_CGC7 | CGCFAM_09600 | Yes | 6 | 3 |
Top CAZyme Families