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Cluster: HRGMv2_0321_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0321_25 HRGMv2_0321_25_18 23132 23863 - GT51
TC HRGMv2_0321_25 HRGMv2_0321_25_19 23919 24596 - 9.B.186.1.3
pfam HRGMv2_0321_25 HRGMv2_0321_25_20 24789 26270 + tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_0321_25 HRGMv2_0321_25_21 26429 28120 + 2.A.81.1.2
NULL(UNKNOWN) HRGMv2_0321_25 HRGMv2_0321_25_22 28148 28297 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0321_25 HRGMv2_0321_25_23 28350 30704 + C10.004
CAZyme HRGMv2_0321_25 HRGMv2_0321_25_24 30908 33469 - GT35
CAZyme HRGMv2_0321_25 HRGMv2_0321_25_25 33492 35159 - GT3
Gene ID: HRGMv2_0321_25_18
Type: CAZyme
Location: 23132 - 23863 (-)
Gene ID: HRGMv2_0321_25_19
Type: TC
Location: 23919 - 24596 (-)
Gene ID: HRGMv2_0321_25_20
Type: pfam
Location: 24789 - 26270 (+)
Gene ID: HRGMv2_0321_25_21
Type: TC
Location: 26429 - 28120 (+)
Gene ID: HRGMv2_0321_25_22
Type:
Location: 28148 - 28297 (-)
Gene ID: HRGMv2_0321_25_23
Type: peptidase
Location: 28350 - 30704 (+)
Gene ID: HRGMv2_0321_25_24
Type: CAZyme
Location: 30908 - 33469 (-)
Gene ID: HRGMv2_0321_25_25
Type: CAZyme
Location: 33492 - 35159 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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