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Cluster: HRGMv2_0321_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0321_2 HRGMv2_0321_2_38 44075 44854 + GT2
CAZyme HRGMv2_0321_2 HRGMv2_0321_2_39 44866 46035 - GT4
CAZyme HRGMv2_0321_2 HRGMv2_0321_2_40 46040 46846 - GT2
CAZyme HRGMv2_0321_2 HRGMv2_0321_2_41 46892 47686 - GT11
pfam HRGMv2_0321_2 HRGMv2_0321_2_42 47683 48741 - Lip_A_acyltrans
CAZyme HRGMv2_0321_2 HRGMv2_0321_2_43 48769 49917 + GT4
sulfatase HRGMv2_0321_2 HRGMv2_0321_2_44 50442 52436 - S1_17
TC HRGMv2_0321_2 HRGMv2_0321_2_45 52467 54350 - 3.A.1.106.1
Gene ID: HRGMv2_0321_2_38
Type: CAZyme
Location: 44075 - 44854 (+)
Gene ID: HRGMv2_0321_2_39
Type: CAZyme
Location: 44866 - 46035 (-)
Gene ID: HRGMv2_0321_2_40
Type: CAZyme
Location: 46040 - 46846 (-)
Gene ID: HRGMv2_0321_2_41
Type: CAZyme
Location: 46892 - 47686 (-)
Gene ID: HRGMv2_0321_2_42
Type: pfam
Location: 47683 - 48741 (-)
Gene ID: HRGMv2_0321_2_43
Type: CAZyme
Location: 48769 - 49917 (+)
Gene ID: HRGMv2_0321_2_44
Type: sulfatase
Location: 50442 - 52436 (-)
Gene ID: HRGMv2_0321_2_45
Type: TC
Location: 52467 - 54350 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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