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Cluster: HRGMv2_0321_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0321_13 HRGMv2_0321_13_22 21381 23402 + 3.A.16.1.3
pfam HRGMv2_0321_13 HRGMv2_0321_13_23 23417 24280 + CTP_transf_1
CAZyme HRGMv2_0321_13 HRGMv2_0321_13_24 24406 25557 - GT19
pfam HRGMv2_0321_13 HRGMv2_0321_13_25 25619 26392 - SurE
TC HRGMv2_0321_13 HRGMv2_0321_13_26 26588 27352 + 8.A.3.2.3
pfam HRGMv2_0321_13 HRGMv2_0321_13_27 27484 28392 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_0321_13 HRGMv2_0321_13_28 28402 29157 + DUF5683
CAZyme HRGMv2_0321_13 HRGMv2_0321_13_29 29096 30547 + GH23
Gene ID: HRGMv2_0321_13_22
Type: TC
Location: 21381 - 23402 (+)
Gene ID: HRGMv2_0321_13_23
Type: pfam
Location: 23417 - 24280 (+)
Gene ID: HRGMv2_0321_13_24
Type: CAZyme
Location: 24406 - 25557 (-)
Gene ID: HRGMv2_0321_13_25
Type: pfam
Location: 25619 - 26392 (-)
Gene ID: HRGMv2_0321_13_26
Type: TC
Location: 26588 - 27352 (+)
Gene ID: HRGMv2_0321_13_27
Type: pfam
Location: 27484 - 28392 (+)
Gene ID: HRGMv2_0321_13_28
Type: pfam
Location: 28402 - 29157 (+)
Gene ID: HRGMv2_0321_13_29
Type: CAZyme
Location: 29096 - 30547 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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