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Cluster: HRGMv2_0321_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0321_21 HRGMv2_0321_21_16 14005 17190 + 1.B.14.6.2
pfam HRGMv2_0321_21 HRGMv2_0321_21_17 17217 18854 + SusD_RagB | SusD-like_3
pfam HRGMv2_0321_21 HRGMv2_0321_21_18 18960 20087 + Alk_phosphatase | Metalloenzyme
CAZyme HRGMv2_0321_21 HRGMv2_0321_21_19 20176 21846 + GH63
pfam HRGMv2_0321_21 HRGMv2_0321_21_20 21873 22712 + ROK
pfam HRGMv2_0321_21 HRGMv2_0321_21_21 22743 24197 + Metallophos | PA14
CAZyme HRGMv2_0321_21 HRGMv2_0321_21_22 24299 28726 - GH36
Gene ID: HRGMv2_0321_21_16
Type: TC
Location: 14005 - 17190 (+)
Gene ID: HRGMv2_0321_21_17
Type: pfam
Location: 17217 - 18854 (+)
Gene ID: HRGMv2_0321_21_18
Type: pfam
Location: 18960 - 20087 (+)
Gene ID: HRGMv2_0321_21_19
Type: CAZyme
Location: 20176 - 21846 (+)
Gene ID: HRGMv2_0321_21_20
Type: pfam
Location: 21873 - 22712 (+)
Gene ID: HRGMv2_0321_21_21
Type: pfam
Location: 22743 - 24197 (+)
Gene ID: HRGMv2_0321_21_22
Type: CAZyme
Location: 24299 - 28726 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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