Genome Details
Selected Rep_genome_ID: HRGMv2_0297
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000432735
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0297 | 3,590,921 | 98.88% | 0.31% | Luxembourg | Europe | HRGM |
| MGYG000001835 | 3,299,974 | 97.69% | 0.19% | Denmark | Europe | UHGG |
| Rep_522 | 3,867,536 | 98.3831% | 1.05721% | NA | NA | WIS |
| VatanenT_2016_SRR4305467_bin.3 | 3,430,653 | 94.42% | 1.486% | Russia | Asia | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0297_CGC3 | CGCFAM_04397 | Yes | 14 | 3 | |
| HRGMv2_0297_CGC16 | CGCFAM_04398 | Yes | 16 | 6 | |
| HRGMv2_0297_CGC31 | CGCFAM_04401 | Yes | 15 | 6 | |
| HRGMv2_0297_CGC1 | CGCFAM_07544 | Yes | 11 | 2 |
Top CAZyme Families