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Cluster: HRGMv2_0297_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0297_23 HRGMv2_0297_23_20 25233 26546 + CE7
TC HRGMv2_0297_23 HRGMv2_0297_23_21 26900 28378 - 2.A.1.14.25
NULL(UNKNOWN) HRGMv2_0297_23 HRGMv2_0297_23_22 28431 28532 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0297_23 HRGMv2_0297_23_23 28514 29437 - KduI
TC HRGMv2_0297_23 HRGMv2_0297_23_24 29482 30867 - 4.A.5.1.3
CAZyme HRGMv2_0297_23 HRGMv2_0297_23_25 31129 33231 + CE8 | GH105
TC HRGMv2_0297_23 HRGMv2_0297_23_26 33333 36581 + 1.B.14.6.1
pfam HRGMv2_0297_23 HRGMv2_0297_23_27 36590 38557 + SusD_RagB | SusD-like_3
pfam HRGMv2_0297_23 HRGMv2_0297_23_28 38584 40224 + DUF5123
CAZyme HRGMv2_0297_23 HRGMv2_0297_23_29 40375 41898 + PL1_2
CAZyme HRGMv2_0297_23 HRGMv2_0297_23_30 41908 43389 + PL1_2
CAZyme HRGMv2_0297_23 HRGMv2_0297_23_31 43666 45864 + CE19 | PL10_1
CAZyme HRGMv2_0297_23 HRGMv2_0297_23_32 45872 47596 + CE12 | CE8
pfam HRGMv2_0297_23 HRGMv2_0297_23_33 47787 48890 - TonB_C
TC HRGMv2_0297_23 HRGMv2_0297_23_34 49237 50835 + 2.A.81.1.2
Gene ID: HRGMv2_0297_23_20
Type: CAZyme
Location: 25233 - 26546 (+)
Gene ID: HRGMv2_0297_23_21
Type: TC
Location: 26900 - 28378 (-)
Gene ID: HRGMv2_0297_23_22
Type:
Location: 28431 - 28532 (+)
Gene ID: HRGMv2_0297_23_23
Type: pfam
Location: 28514 - 29437 (-)
Gene ID: HRGMv2_0297_23_24
Type: TC
Location: 29482 - 30867 (-)
Gene ID: HRGMv2_0297_23_25
Type: CAZyme
Location: 31129 - 33231 (+)
Gene ID: HRGMv2_0297_23_26
Type: TC
Location: 33333 - 36581 (+)
Gene ID: HRGMv2_0297_23_27
Type: pfam
Location: 36590 - 38557 (+)
Gene ID: HRGMv2_0297_23_28
Type: pfam
Location: 38584 - 40224 (+)
Gene ID: HRGMv2_0297_23_29
Type: CAZyme
Location: 40375 - 41898 (+)
Gene ID: HRGMv2_0297_23_30
Type: CAZyme
Location: 41908 - 43389 (+)
Gene ID: HRGMv2_0297_23_31
Type: CAZyme
Location: 43666 - 45864 (+)
Gene ID: HRGMv2_0297_23_32
Type: CAZyme
Location: 45872 - 47596 (+)
Gene ID: HRGMv2_0297_23_33
Type: pfam
Location: 47787 - 48890 (-)
Gene ID: HRGMv2_0297_23_34
Type: TC
Location: 49237 - 50835 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0297_23_27 vegetarian > omnivore 1.38822 0.02872
HRGMv2_0297_23_27 vegetarian > vegan 1.32655 0.03214
HRGMv2_0297_23_28 vegetarian > omnivore 1.62845 0.02872
HRGMv2_0297_23_28 vegetarian > vegan 1.42017 0.03214
HRGMv2_0297_23_32 vegan > omnivore 1.99729 0.04376

🧭 Explore Read Mapping of CGC

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