Genome Details
Selected Rep_genome_ID: HRGMv2_0250
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella faecis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG500_4 | 3,518,597 | 99.32% | 0.68% | NA | Africa | H3AfricaPhase2 |
| GCA_021623105.1_ASM2162310v1_genomic | 3,273,278 | 97.97% | 0.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021631505.1_ASM2163150v1_genomic | 2,875,023 | 90.38% | 0.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021636105.1_ASM2163610v1_genomic | 3,348,780 | 92.58% | 3.93% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0250 | 2,955,086 | 99.32% | 0.675% | Japan | Asia | HRGM |
| Rep_261 | 2,937,832 | 98.1883% | 0.675676% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0250_CGC21 | CGCFAM_00001 | Yes | 5 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0250_CGC7 | CGCFAM_00034 | Yes | 10 | 5 | |
| HRGMv2_0250_CGC29 | CGCFAM_00071 | Yes | 7 | 2 | |
| HRGMv2_0250_CGC2 | CGCFAM_00181 | Yes | 6 | 2 | |
| HRGMv2_0250_CGC28 | CGCFAM_00192 | Yes | 6 | 1 | |
| HRGMv2_0250_CGC11 | CGCFAM_00513 | Yes | 5 | 2 | |
| HRGMv2_0250_CGC14 | CGCFAM_00612 | Yes | 11 | 4 | |
| HRGMv2_0250_CGC10 | CGCFAM_00644 | Yes | 3 | 1 | |
| HRGMv2_0250_CGC19 | CGCFAM_01520 | Yes | 4 | 2 | |
| HRGMv2_0250_CGC23 | CGCFAM_01582 | Yes | 4 | 1 | |
| HRGMv2_0250_CGC1 | CGCFAM_02411 | Yes | 11 | 8 | |
| HRGMv2_0250_CGC37 | CGCFAM_02609 | Yes | 4 | 1 | |
| HRGMv2_0250_CGC5 | CGCFAM_03276 | Yes | 3 | 1 | |
| HRGMv2_0250_CGC25 | CGCFAM_05083 | Yes | 3 | 1 | |
| HRGMv2_0250_CGC32 | CGCFAM_05806 | Yes | 4 | 1 | |
| HRGMv2_0250_CGC9 | CGCFAM_05962 | Yes | 4 | 2 | |
| HRGMv2_0250_CGC35 | CGCFAM_07029 | Yes | 8 | 5 |
Top CAZyme Families