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Cluster: HRGMv2_0250_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0250_49 HRGMv2_0250_49_3 1271 2584 - GH29
CAZyme HRGMv2_0250_49 HRGMv2_0250_49_4 2719 4320 + GH20
pfam HRGMv2_0250_49 HRGMv2_0250_49_5 4441 5925 - tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_0250_49 HRGMv2_0250_49_6 6158 6844 + 9.B.186.1.3
CAZyme HRGMv2_0250_49 HRGMv2_0250_49_7 6888 7631 + GT51
pfam HRGMv2_0250_49 HRGMv2_0250_49_8 7678 10242 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
pfam HRGMv2_0250_49 HRGMv2_0250_49_9 10512 11969 - DUF4270
CAZyme HRGMv2_0250_49 HRGMv2_0250_49_10 12103 12915 - GT5
pfam HRGMv2_0250_49 HRGMv2_0250_49_11 13152 13583 - Biotin_lipoyl | Biotin_lipoyl_2
NULL(UNKNOWN) HRGMv2_0250_49 HRGMv2_0250_49_12 13583 13738 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0250_49 HRGMv2_0250_49_13 13778 15343 - 3.B.1.1.2
Gene ID: HRGMv2_0250_49_3
Type: CAZyme
Location: 1271 - 2584 (-)
Gene ID: HRGMv2_0250_49_4
Type: CAZyme
Location: 2719 - 4320 (+)
Gene ID: HRGMv2_0250_49_5
Type: pfam
Location: 4441 - 5925 (-)
Gene ID: HRGMv2_0250_49_6
Type: TC
Location: 6158 - 6844 (+)
Gene ID: HRGMv2_0250_49_7
Type: CAZyme
Location: 6888 - 7631 (+)
Gene ID: HRGMv2_0250_49_8
Type: pfam
Location: 7678 - 10242 (+)
Gene ID: HRGMv2_0250_49_9
Type: pfam
Location: 10512 - 11969 (-)
Gene ID: HRGMv2_0250_49_10
Type: CAZyme
Location: 12103 - 12915 (-)
Gene ID: HRGMv2_0250_49_11
Type: pfam
Location: 13152 - 13583 (-)
Gene ID: HRGMv2_0250_49_12
Type:
Location: 13583 - 13738 (-)
Gene ID: HRGMv2_0250_49_13
Type: TC
Location: 13778 - 15343 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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