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Cluster: HRGMv2_0250_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0250_122 HRGMv2_0250_122_22 28768 29442 - 9.B.18.1.3
CAZyme HRGMv2_0250_122 HRGMv2_0250_122_23 29477 30268 - GT2
CAZyme HRGMv2_0250_122 HRGMv2_0250_122_24 30461 31261 + GH16_3
CAZyme HRGMv2_0250_122 HRGMv2_0250_122_25 31228 32103 - GT11
CAZyme HRGMv2_0250_122 HRGMv2_0250_122_26 32100 33086 - GT4
pfam HRGMv2_0250_122 HRGMv2_0250_122_27 33083 33952 - C5-epim_C
pfam HRGMv2_0250_122 HRGMv2_0250_122_28 33999 35141 - Glyco_tran_WbsX
CAZyme HRGMv2_0250_122 HRGMv2_0250_122_29 35080 36312 - GT4
Gene ID: HRGMv2_0250_122_22
Type: TC
Location: 28768 - 29442 (-)
Gene ID: HRGMv2_0250_122_23
Type: CAZyme
Location: 29477 - 30268 (-)
Gene ID: HRGMv2_0250_122_24
Type: CAZyme
Location: 30461 - 31261 (+)
Gene ID: HRGMv2_0250_122_25
Type: CAZyme
Location: 31228 - 32103 (-)
Gene ID: HRGMv2_0250_122_26
Type: CAZyme
Location: 32100 - 33086 (-)
Gene ID: HRGMv2_0250_122_27
Type: pfam
Location: 33083 - 33952 (-)
Gene ID: HRGMv2_0250_122_28
Type: pfam
Location: 33999 - 35141 (-)
Gene ID: HRGMv2_0250_122_29
Type: CAZyme
Location: 35080 - 36312 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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