Genome Details
Selected Rep_genome_ID: HRGMv2_0170
Total Genomes Found: 17
Total Genomes Found: 17
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp003447235
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C37.CMAG_3 | 3,200,578 | 98.03% | 0.53% | China(Inner Mongolia) | Asia | IMGG |
| CGMR011542 | 2,220,172 | 93.94% | 0% | China | Asia | CGMR |
| GCA_021615695.1_ASM2161569v1_genomic | 2,176,129 | 93.76% | 1.07% | NA | Africa | H3AfricaPhase1 |
| GCA_021624405.1_ASM2162440v1_genomic | 2,614,852 | 96.43% | 1.78% | NA | Africa | H3AfricaPhase1 |
| GCA_021626495.1_ASM2162649v1_genomic | 2,436,302 | 94.85% | 0.93% | NA | Africa | H3AfricaPhase1 |
| GCA_021627355.1_ASM2162735v1_genomic | 2,673,078 | 95.13% | 1.42% | NA | Africa | H3AfricaPhase1 |
| GCA_021633465.1_ASM2163346v1_genomic | 2,524,470 | 96.75% | 0.36% | NA | Africa | H3AfricaPhase1 |
| GCA_021633905.1_ASM2163390v1_genomic | 2,576,177 | 94.47% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021639205.1_ASM2163920v1_genomic | 2,286,953 | 90.15% | 0.2% | NA | Africa | H3AfricaPhase1 |
| GCA_021640445.1_ASM2164044v1_genomic | 2,592,859 | 97.3% | 0% | NA | Africa | H3AfricaPhase1 |
| GH122_44 | 2,812,974 | 98.03% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_0170 | 2,712,639 | 98.03% | 0% | South Korea | Asia | HRGM |
| MGYG000001866 | 2,708,253 | 98.03% | 0% | Denmark | Europe | UHGG |
| Rep_259 | 3,099,642 | 97.8533% | 0.177936% | NA | NA | WIS |
| SPMP43_bin.72 | 2,629,176 | 95.1% | 0% | Singapore | Asia | SPMP |
| SPMP78_bin.29 | 2,493,279 | 94.7% | 0.71% | Singapore | Asia | SPMP |
| VatanenT_2016_SRR4408264_bin.2 | 2,204,990 | 95.36% | 0.711% | Estonia | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0170_CGC10 | CGCFAM_00034 | Yes | 18 | 6 | |
| HRGMv2_0170_CGC19 | CGCFAM_00059 | Yes | 10 | 4 | |
| HRGMv2_0170_CGC5 | CGCFAM_00220 | Yes | 3 | 1 | |
| HRGMv2_0170_CGC18 | CGCFAM_00589 | Yes | 4 | 1 | |
| HRGMv2_0170_CGC6 | CGCFAM_00630 | Yes | 6 | 1 | |
| HRGMv2_0170_CGC9 | CGCFAM_01003 | Yes | 4 | 2 | |
| HRGMv2_0170_CGC11 | CGCFAM_01270 | Yes | 10 | 2 | |
| HRGMv2_0170_CGC16 | CGCFAM_01311 | Yes | 6 | 1 | |
| HRGMv2_0170_CGC2 | CGCFAM_01919 | Yes | 6 | 2 | |
| HRGMv2_0170_CGC12 | CGCFAM_03277 | Yes | 3 | 2 | |
| HRGMv2_0170_CGC3 | CGCFAM_07158 | Yes | 10 | 4 |
Top CAZyme Families