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Cluster: HRGMv2_0170_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0170_30 HRGMv2_0170_30_8 10021 10896 + GH25
pfam HRGMv2_0170_30 HRGMv2_0170_30_9 10808 11704 - MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) HRGMv2_0170_30 HRGMv2_0170_30_10 11949 12920 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0170_30 HRGMv2_0170_30_11 13045 14577 + 1.B.9.4.2
pfam HRGMv2_0170_30 HRGMv2_0170_30_12 14729 15451 + TauE
NULL(UNKNOWN) HRGMv2_0170_30 HRGMv2_0170_30_13 15626 16126 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0170_30 HRGMv2_0170_30_14 16319 17314 - GT2
pfam HRGMv2_0170_30 HRGMv2_0170_30_15 17298 18806 - Polysacc_synt | Polysacc_synt_3
CAZyme HRGMv2_0170_30 HRGMv2_0170_30_16 18863 19759 + GT2
CAZyme HRGMv2_0170_30 HRGMv2_0170_30_17 19708 20697 + GT2
Gene ID: HRGMv2_0170_30_8
Type: CAZyme
Location: 10021 - 10896 (+)
Gene ID: HRGMv2_0170_30_9
Type: pfam
Location: 10808 - 11704 (-)
Gene ID: HRGMv2_0170_30_10
Type:
Location: 11949 - 12920 (+)
Gene ID: HRGMv2_0170_30_11
Type: TC
Location: 13045 - 14577 (+)
Gene ID: HRGMv2_0170_30_12
Type: pfam
Location: 14729 - 15451 (+)
Gene ID: HRGMv2_0170_30_13
Type:
Location: 15626 - 16126 (+)
Gene ID: HRGMv2_0170_30_14
Type: CAZyme
Location: 16319 - 17314 (-)
Gene ID: HRGMv2_0170_30_15
Type: pfam
Location: 17298 - 18806 (-)
Gene ID: HRGMv2_0170_30_16
Type: CAZyme
Location: 18863 - 19759 (+)
Gene ID: HRGMv2_0170_30_17
Type: CAZyme
Location: 19708 - 20697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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