dbCAN Logo

Cluster: HRGMv2_0170_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0170_1 HRGMv2_0170_1_132 163661 164695 + GH73
pfam HRGMv2_0170_1 HRGMv2_0170_1_133 164856 165389 + Sua5_yciO_yrdC
TC HRGMv2_0170_1 HRGMv2_0170_1_134 165459 167279 + 2.A.49.6.4
pfam HRGMv2_0170_1 HRGMv2_0170_1_135 167473 168444 + Formyl_trans_N | Formyl_trans_C
CAZyme HRGMv2_0170_1 HRGMv2_0170_1_136 168759 170255 - GH57
CAZyme HRGMv2_0170_1 HRGMv2_0170_1_137 170405 171661 - GT4
CAZyme HRGMv2_0170_1 HRGMv2_0170_1_138 171703 173652 - GH133
NULL(UNKNOWN) HRGMv2_0170_1 HRGMv2_0170_1_139 173868 173957 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0170_1 HRGMv2_0170_1_140 173954 174382 + PDDEXK_3
TC HRGMv2_0170_1 HRGMv2_0170_1_141 175420 176373 + 2.A.4.7.9
Gene ID: HRGMv2_0170_1_132
Type: CAZyme
Location: 163661 - 164695 (+)
Gene ID: HRGMv2_0170_1_133
Type: pfam
Location: 164856 - 165389 (+)
Gene ID: HRGMv2_0170_1_134
Type: TC
Location: 165459 - 167279 (+)
Gene ID: HRGMv2_0170_1_135
Type: pfam
Location: 167473 - 168444 (+)
Gene ID: HRGMv2_0170_1_136
Type: CAZyme
Location: 168759 - 170255 (-)
Gene ID: HRGMv2_0170_1_137
Type: CAZyme
Location: 170405 - 171661 (-)
Gene ID: HRGMv2_0170_1_138
Type: CAZyme
Location: 171703 - 173652 (-)
Gene ID: HRGMv2_0170_1_139
Type:
Location: 173868 - 173957 (+)
Gene ID: HRGMv2_0170_1_140
Type: pfam
Location: 173954 - 174382 (+)
Gene ID: HRGMv2_0170_1_141
Type: TC
Location: 175420 - 176373 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List