Genome Details
Selected Rep_genome_ID: HRGMv2_0164
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus pleomorphus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG432_50 | 2,995,726 | 97.17% | 0.88% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_0164 | 2,861,818 | 97.16% | 0.503% | South Korea | Asia | HRGM |
| MGYG000003233 | 2,919,315 | 95.66% | 0.69% | United States | North America | UHGG |
| Rep_272 | 2,678,662 | 94.5283% | 0.628931% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0164_CGC14 | CGCFAM_00005 | Yes | 6 | 5 | |
| HRGMv2_0164_CGC22 | CGCFAM_00017 | Yes | 5 | 1 | fructan |
| HRGMv2_0164_CGC27 | CGCFAM_00071 | Yes | 5 | 2 | |
| HRGMv2_0164_CGC15 | CGCFAM_00143 | Yes | 5 | 2 | |
| HRGMv2_0164_CGC10 | CGCFAM_00531 | Yes | 7 | 1 | |
| HRGMv2_0164_CGC18 | CGCFAM_01257 | Yes | 9 | 2 | |
| HRGMv2_0164_CGC4 | CGCFAM_02649 | Yes | 8 | 2 | |
| HRGMv2_0164_CGC31 | CGCFAM_03166 | Yes | 3 | 1 | |
| HRGMv2_0164_CGC12 | CGCFAM_04868 | Yes | 4 | 1 | |
| HRGMv2_0164_CGC8 | CGCFAM_05608 | Yes | 4 | 1 | |
| HRGMv2_0164_CGC2 | CGCFAM_05860 | Yes | 4 | 1 | |
| HRGMv2_0164_CGC29 | CGCFAM_05926 | Yes | 3 | 1 | |
| HRGMv2_0164_CGC5 | CGCFAM_09461 | Yes | 3 | 1 | |
| HRGMv2_0164_CGC17 | CGCFAM_09521 | Yes | 8 | 1 | |
| HRGMv2_0164_CGC24 | CGCFAM_09522 | Yes | 5 | 1 | |
| HRGMv2_0164_CGC26 | CGCFAM_09523 | Yes | 6 | 4 |
Top CAZyme Families