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Cluster: HRGMv2_0164_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0164_12 HRGMv2_0164_12_29 44155 45726 - 9.A.25.1.1
TC HRGMv2_0164_12 HRGMv2_0164_12_30 45748 46725 - 9.A.25.1.1
TC HRGMv2_0164_12 HRGMv2_0164_12_31 46822 48267 - 9.A.25.1.1
pfam HRGMv2_0164_12 HRGMv2_0164_12_32 48271 49272 - PorP_SprF
TC HRGMv2_0164_12 HRGMv2_0164_12_33 49265 49984 - 1.B.44.1.1
pfam HRGMv2_0164_12 HRGMv2_0164_12_34 50065 51129 - Acyl_transf_3
CAZyme HRGMv2_0164_12 HRGMv2_0164_12_35 51122 52306 - GT2
Gene ID: HRGMv2_0164_12_29
Type: TC
Location: 44155 - 45726 (-)
Gene ID: HRGMv2_0164_12_30
Type: TC
Location: 45748 - 46725 (-)
Gene ID: HRGMv2_0164_12_31
Type: TC
Location: 46822 - 48267 (-)
Gene ID: HRGMv2_0164_12_32
Type: pfam
Location: 48271 - 49272 (-)
Gene ID: HRGMv2_0164_12_33
Type: TC
Location: 49265 - 49984 (-)
Gene ID: HRGMv2_0164_12_34
Type: pfam
Location: 50065 - 51129 (-)
Gene ID: HRGMv2_0164_12_35
Type: CAZyme
Location: 51122 - 52306 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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