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Cluster: HRGMv2_0164_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0164_29 HRGMv2_0164_29_2 1869 4340 - 3.A.11.3.1
CAZyme HRGMv2_0164_29 HRGMv2_0164_29_3 4337 5527 - GT4
TF HRGMv2_0164_29 HRGMv2_0164_29_4 5679 6524 - HTH_AraC
pfam HRGMv2_0164_29 HRGMv2_0164_29_5 6652 7815 + Fe-ADH | ADH_Fe_C
TC HRGMv2_0164_29 HRGMv2_0164_29_6 7898 8710 + 8.A.5.1.6
peptidase HRGMv2_0164_29 HRGMv2_0164_29_7 9470 11035 + C10.UPW
NULL(UNKNOWN) HRGMv2_0164_29 HRGMv2_0164_29_8 11075 11653 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0164_29 HRGMv2_0164_29_9 11821 14115 + 1.B.14.6.12
Gene ID: HRGMv2_0164_29_2
Type: TC
Location: 1869 - 4340 (-)
Gene ID: HRGMv2_0164_29_3
Type: CAZyme
Location: 4337 - 5527 (-)
Gene ID: HRGMv2_0164_29_4
Type: TF
Location: 5679 - 6524 (-)
Gene ID: HRGMv2_0164_29_5
Type: pfam
Location: 6652 - 7815 (+)
Gene ID: HRGMv2_0164_29_6
Type: TC
Location: 7898 - 8710 (+)
Gene ID: HRGMv2_0164_29_7
Type: peptidase
Location: 9470 - 11035 (+)
Gene ID: HRGMv2_0164_29_8
Type:
Location: 11075 - 11653 (+)
Gene ID: HRGMv2_0164_29_9
Type: TC
Location: 11821 - 14115 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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