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Cluster: HRGMv2_0164_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0164_7 HRGMv2_0164_7_39 41011 44163 - 1.B.14.6.2
TC HRGMv2_0164_7 HRGMv2_0164_7_40 44561 45934 + 2.A.66.1.33
CAZyme HRGMv2_0164_7 HRGMv2_0164_7_41 45903 46991 - GT4
NULL(UNKNOWN) HRGMv2_0164_7 HRGMv2_0164_7_42 47273 52381 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0164_7 HRGMv2_0164_7_43 52681 54321 + GH20
NULL(UNKNOWN) HRGMv2_0164_7 HRGMv2_0164_7_44 54458 56725 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0164_7 HRGMv2_0164_7_45 57115 58083 + EamA | EamA
TC HRGMv2_0164_7 HRGMv2_0164_7_46 58257 61253 + 1.C.105.2.12
Gene ID: HRGMv2_0164_7_39
Type: TC
Location: 41011 - 44163 (-)
Gene ID: HRGMv2_0164_7_40
Type: TC
Location: 44561 - 45934 (+)
Gene ID: HRGMv2_0164_7_41
Type: CAZyme
Location: 45903 - 46991 (-)
Gene ID: HRGMv2_0164_7_42
Type:
Location: 47273 - 52381 (-)
Gene ID: HRGMv2_0164_7_43
Type: CAZyme
Location: 52681 - 54321 (+)
Gene ID: HRGMv2_0164_7_44
Type:
Location: 54458 - 56725 (-)
Gene ID: HRGMv2_0164_7_45
Type: pfam
Location: 57115 - 58083 (+)
Gene ID: HRGMv2_0164_7_46
Type: TC
Location: 58257 - 61253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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