Cluster: HRGMv2_0164_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0164
- CGC Family ID: CGCFAM_00143
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0164_22 | HRGMv2_0164_22_14 | 14833 | 17463 | + | 9.B.144.1.4 |
| NULL(UNKNOWN) | HRGMv2_0164_22 | HRGMv2_0164_22_15 | 17474 | 18193 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0164_22 | HRGMv2_0164_22_16 | 18229 | 19053 | + | GT11 |
| pfam | HRGMv2_0164_22 | HRGMv2_0164_22_17 | 19077 | 22439 | - | DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter |
| CAZyme | HRGMv2_0164_22 | HRGMv2_0164_22_18 | 22596 | 24773 | - | GH97 |
Gene ID: HRGMv2_0164_22_14
Type: TC
Location: 14833 - 17463 (+)
Type: TC
Location: 14833 - 17463 (+)
Gene ID: HRGMv2_0164_22_15
Type:
Location: 17474 - 18193 (+)
Type:
Location: 17474 - 18193 (+)
Gene ID: HRGMv2_0164_22_16
Type: CAZyme
Location: 18229 - 19053 (+)
Type: CAZyme
Location: 18229 - 19053 (+)
Gene ID: HRGMv2_0164_22_17
Type: pfam
Location: 19077 - 22439 (-)
Type: pfam
Location: 19077 - 22439 (-)
Gene ID: HRGMv2_0164_22_18
Type: CAZyme
Location: 22596 - 24773 (-)
Type: CAZyme
Location: 22596 - 24773 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus pleomorphus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.