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Genome Details

Selected Rep_genome_ID: CGMR088013
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella oris
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR088013 2,802,325 98.65% 0% China Asia CGMR
HRGMv2_0550 2,623,739 95.04% 0.112% Japan Asia HRGM
MGYG000003878 2,959,023 95.68% 0.45% United States North America UHGG
Rep_197 2,610,889 98.0116% 0.168919% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR088013_CGC26 CGCFAM_00002 Yes 5 3
CGMR088013_CGC36 CGCFAM_00017 Yes 8 2 fructan
CGMR088013_CGC15 CGCFAM_00032 Yes 3 1
CGMR088013_CGC29 CGCFAM_00034 Yes 8 4
CGMR088013_CGC10 CGCFAM_00081 Yes 16 2
CGMR088013_CGC43 CGCFAM_00095 Yes 9 3
CGMR088013_CGC30 CGCFAM_00108 Yes 5 2 pectin
CGMR088013_CGC37 CGCFAM_00180 Yes 4 1
CGMR088013_CGC38 CGCFAM_00186 Yes 3 1
CGMR088013_CGC11 CGCFAM_00333 Yes 11 7 beta-mannan
CGMR088013_CGC24 CGCFAM_00536 Yes 7 2
CGMR088013_CGC14 CGCFAM_00612 Yes 4 1
CGMR088013_CGC41 CGCFAM_00630 Yes 3 1
CGMR088013_CGC16 CGCFAM_00665 Yes 3 2
CGMR088013_CGC35 CGCFAM_00669 Yes 4 1
CGMR088013_CGC22 CGCFAM_00862 Yes 13 2
CGMR088013_CGC20 CGCFAM_00897 Yes 7 2
CGMR088013_CGC2 CGCFAM_01216 Yes 3 1
CGMR088013_CGC25 CGCFAM_01244 Yes 6 3 pectin
CGMR088013_CGC13 CGCFAM_01769 Yes 3 1
CGMR088013_CGC21 CGCFAM_02418 Yes 3 1
CGMR088013_CGC17 CGCFAM_03046 Yes 3 1
CGMR088013_CGC31 CGCFAM_03065 Yes 5 3
CGMR088013_CGC5 CGCFAM_04548 Yes 3 2
CGMR088013_CGC8 CGCFAM_05362 Yes 3 1
Top CAZyme Families