Cluster: CGMR088013_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088013
- CGC Family ID: CGCFAM_00862
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_61594 | k141_61594_39 | 43723 | 44628 | - | 2.A.115.1.1 |
| TC | k141_61594 | k141_61594_40 | 44713 | 46296 | - | 2.A.14.1.2 |
| NULL(UNKNOWN) | k141_61594 | k141_61594_41 | 46501 | 46602 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_61594 | k141_61594_42 | 47121 | 48806 | - | SusD_RagB | SusD-like_3 |
| TC | k141_61594 | k141_61594_43 | 48818 | 51586 | - | 1.B.14.6.1 |
| pfam | k141_61594 | k141_61594_44 | 51616 | 53454 | - | SusD_RagB | SusD-like_3 |
| TC | k141_61594 | k141_61594_45 | 53467 | 56565 | - | 1.B.14.6.1 |
| CAZyme | k141_61594 | k141_61594_46 | 57397 | 58575 | - | GT19 |
| pfam | k141_61594 | k141_61594_47 | 58592 | 59362 | - | SurE |
| TC | k141_61594 | k141_61594_48 | 59379 | 60230 | + | 8.A.3.2.3 |
| TF | k141_61594 | k141_61594_49 | 60266 | 61156 | + | HTH_3 |
| pfam | k141_61594 | k141_61594_50 | 61160 | 61873 | + | DUF5683 |
| CAZyme | k141_61594 | k141_61594_51 | 61938 | 63302 | + | GH23 |
Gene ID: k141_61594_39
Type: TC
Location: 43723 - 44628 (-)
Type: TC
Location: 43723 - 44628 (-)
Gene ID: k141_61594_40
Type: TC
Location: 44713 - 46296 (-)
Type: TC
Location: 44713 - 46296 (-)
Gene ID: k141_61594_41
Type:
Location: 46501 - 46602 (-)
Type:
Location: 46501 - 46602 (-)
Gene ID: k141_61594_42
Type: pfam
Location: 47121 - 48806 (-)
Type: pfam
Location: 47121 - 48806 (-)
Gene ID: k141_61594_43
Type: TC
Location: 48818 - 51586 (-)
Type: TC
Location: 48818 - 51586 (-)
Gene ID: k141_61594_44
Type: pfam
Location: 51616 - 53454 (-)
Type: pfam
Location: 51616 - 53454 (-)
Gene ID: k141_61594_45
Type: TC
Location: 53467 - 56565 (-)
Type: TC
Location: 53467 - 56565 (-)
Gene ID: k141_61594_46
Type: CAZyme
Location: 57397 - 58575 (-)
Type: CAZyme
Location: 57397 - 58575 (-)
Gene ID: k141_61594_47
Type: pfam
Location: 58592 - 59362 (-)
Type: pfam
Location: 58592 - 59362 (-)
Gene ID: k141_61594_48
Type: TC
Location: 59379 - 60230 (+)
Type: TC
Location: 59379 - 60230 (+)
Gene ID: k141_61594_49
Type: TF
Location: 60266 - 61156 (+)
Type: TF
Location: 60266 - 61156 (+)
Gene ID: k141_61594_50
Type: pfam
Location: 61160 - 61873 (+)
Type: pfam
Location: 61160 - 61873 (+)
Gene ID: k141_61594_51
Type: CAZyme
Location: 61938 - 63302 (+)
Type: CAZyme
Location: 61938 - 63302 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella oris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.