Cluster: CGMR088013_CGC10
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088013
- CGC Family ID: CGCFAM_00081
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_32371 | k141_32371_12 | 12885 | 14171 | - | GH18 |
| CAZyme | k141_32371 | k141_32371_13 | 14211 | 16631 | - | GH3 |
| NULL(UNKNOWN) | k141_32371 | k141_32371_14 | 16660 | 16869 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_32371 | k141_32371_15 | 16788 | 18434 | - | 8.A.46.1.6 |
| TC | k141_32371 | k141_32371_16 | 18461 | 21391 | - | 1.B.14.6.1 |
| TF | k141_32371 | k141_32371_17 | 21592 | 25488 | - | HTH_AraC |
| TC | k141_32371 | k141_32371_18 | 26055 | 27554 | - | 3.D.9.1.1 |
| TC | k141_32371 | k141_32371_19 | 27587 | 29089 | - | 3.D.9.1.1 |
| TC | k141_32371 | k141_32371_20 | 29123 | 31105 | - | 3.D.1.2.1 |
| TC | k141_32371 | k141_32371_21 | 31111 | 31422 | - | 3.D.1.2.1 |
| TC | k141_32371 | k141_32371_22 | 31419 | 31940 | - | 3.D.9.1.1 |
| STP | k141_32371 | k141_32371_23 | 31947 | 32480 | - | Fer4 | Fer4 |
| TC | k141_32371 | k141_32371_24 | 32516 | 33586 | - | 3.D.1.5.1 |
| TC | k141_32371 | k141_32371_25 | 33589 | 35160 | - | 3.D.1.5.1 |
| TC | k141_32371 | k141_32371_26 | 35175 | 35897 | - | 3.D.1.6.1 |
| TC | k141_32371 | k141_32371_27 | 35888 | 36238 | - | 3.D.1.8.1 |
Gene ID: k141_32371_12
Type: CAZyme
Location: 12885 - 14171 (-)
Type: CAZyme
Location: 12885 - 14171 (-)
Gene ID: k141_32371_13
Type: CAZyme
Location: 14211 - 16631 (-)
Type: CAZyme
Location: 14211 - 16631 (-)
Gene ID: k141_32371_14
Type:
Location: 16660 - 16869 (+)
Type:
Location: 16660 - 16869 (+)
Gene ID: k141_32371_15
Type: TC
Location: 16788 - 18434 (-)
Type: TC
Location: 16788 - 18434 (-)
Gene ID: k141_32371_16
Type: TC
Location: 18461 - 21391 (-)
Type: TC
Location: 18461 - 21391 (-)
Gene ID: k141_32371_17
Type: TF
Location: 21592 - 25488 (-)
Type: TF
Location: 21592 - 25488 (-)
Gene ID: k141_32371_18
Type: TC
Location: 26055 - 27554 (-)
Type: TC
Location: 26055 - 27554 (-)
Gene ID: k141_32371_19
Type: TC
Location: 27587 - 29089 (-)
Type: TC
Location: 27587 - 29089 (-)
Gene ID: k141_32371_20
Type: TC
Location: 29123 - 31105 (-)
Type: TC
Location: 29123 - 31105 (-)
Gene ID: k141_32371_21
Type: TC
Location: 31111 - 31422 (-)
Type: TC
Location: 31111 - 31422 (-)
Gene ID: k141_32371_22
Type: TC
Location: 31419 - 31940 (-)
Type: TC
Location: 31419 - 31940 (-)
Gene ID: k141_32371_23
Type: STP
Location: 31947 - 32480 (-)
Type: STP
Location: 31947 - 32480 (-)
Gene ID: k141_32371_24
Type: TC
Location: 32516 - 33586 (-)
Type: TC
Location: 32516 - 33586 (-)
Gene ID: k141_32371_25
Type: TC
Location: 33589 - 35160 (-)
Type: TC
Location: 33589 - 35160 (-)
Gene ID: k141_32371_26
Type: TC
Location: 35175 - 35897 (-)
Type: TC
Location: 35175 - 35897 (-)
Gene ID: k141_32371_27
Type: TC
Location: 35888 - 36238 (-)
Type: TC
Location: 35888 - 36238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella oris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.