Cluster: CGMR088013_CGC36
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: CGMR088013
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19181 | k141_19181_14 | 14350 | 17448 | + | 1.B.14.6.1 |
| pfam | k141_19181 | k141_19181_15 | 17459 | 19192 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_19181 | k141_19181_16 | 19186 | 20580 | + | DUF4960 |
| CAZyme | k141_19181 | k141_19181_17 | 20591 | 22189 | + | GH32 |
| CAZyme | k141_19181 | k141_19181_18 | 22204 | 23934 | + | GH32 |
| TC | k141_19181 | k141_19181_19 | 24080 | 25258 | + | 2.A.1.7.17 |
| STP | k141_19181 | k141_19181_20 | 25467 | 26348 | + | PfkB |
| TC | k141_19181 | k141_19181_21 | 28035 | 31025 | - | 2.A.6.4.3 |
Gene ID: k141_19181_14
Type: TC
Location: 14350 - 17448 (+)
Type: TC
Location: 14350 - 17448 (+)
Gene ID: k141_19181_15
Type: pfam
Location: 17459 - 19192 (+)
Type: pfam
Location: 17459 - 19192 (+)
Gene ID: k141_19181_16
Type: pfam
Location: 19186 - 20580 (+)
Type: pfam
Location: 19186 - 20580 (+)
Gene ID: k141_19181_17
Type: CAZyme
Location: 20591 - 22189 (+)
Type: CAZyme
Location: 20591 - 22189 (+)
Gene ID: k141_19181_18
Type: CAZyme
Location: 22204 - 23934 (+)
Type: CAZyme
Location: 22204 - 23934 (+)
Gene ID: k141_19181_19
Type: TC
Location: 24080 - 25258 (+)
Type: TC
Location: 24080 - 25258 (+)
Gene ID: k141_19181_20
Type: STP
Location: 25467 - 26348 (+)
Type: STP
Location: 25467 - 26348 (+)
Gene ID: k141_19181_21
Type: TC
Location: 28035 - 31025 (-)
Type: TC
Location: 28035 - 31025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella oris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.