Cluster: CGMR088013_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate: beta-mannan
- Genome ID: CGMR088013
- CGC Family ID: CGCFAM_00333
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39846 | k141_39846_15 | 12485 | 13909 | - | 2.A.2.3.6 |
| CAZyme | k141_39846 | k141_39846_16 | 13906 | 15069 | - | GH130_1 |
| CAZyme | k141_39846 | k141_39846_17 | 15083 | 16186 | - | GH26 |
| CAZyme | k141_39846 | k141_39846_18 | 16229 | 17509 | - | GH5_7 |
| CAZyme | k141_39846 | k141_39846_19 | 17522 | 18820 | - | CE7 |
| CAZyme | k141_39846 | k141_39846_20 | 18862 | 20085 | - | GH27 |
| CAZyme | k141_39846 | k141_39846_21 | 20588 | 22009 | - | CE20 |
| CAZyme | k141_39846 | k141_39846_22 | 22095 | 23765 | - | GH26 |
| pfam | k141_39846 | k141_39846_23 | 23904 | 25190 | - | TIG | SGBP_B_XBD |
| pfam | k141_39846 | k141_39846_24 | 25217 | 26977 | - | SusD_RagB | SusD-like_3 |
| TC | k141_39846 | k141_39846_25 | 26996 | 30280 | - | 1.B.14.6.1 |
Gene ID: k141_39846_15
Type: TC
Location: 12485 - 13909 (-)
Type: TC
Location: 12485 - 13909 (-)
Gene ID: k141_39846_16
Type: CAZyme
Location: 13906 - 15069 (-)
Type: CAZyme
Location: 13906 - 15069 (-)
Gene ID: k141_39846_17
Type: CAZyme
Location: 15083 - 16186 (-)
Type: CAZyme
Location: 15083 - 16186 (-)
Gene ID: k141_39846_18
Type: CAZyme
Location: 16229 - 17509 (-)
Type: CAZyme
Location: 16229 - 17509 (-)
Gene ID: k141_39846_19
Type: CAZyme
Location: 17522 - 18820 (-)
Type: CAZyme
Location: 17522 - 18820 (-)
Gene ID: k141_39846_20
Type: CAZyme
Location: 18862 - 20085 (-)
Type: CAZyme
Location: 18862 - 20085 (-)
Gene ID: k141_39846_21
Type: CAZyme
Location: 20588 - 22009 (-)
Type: CAZyme
Location: 20588 - 22009 (-)
Gene ID: k141_39846_22
Type: CAZyme
Location: 22095 - 23765 (-)
Type: CAZyme
Location: 22095 - 23765 (-)
Gene ID: k141_39846_23
Type: pfam
Location: 23904 - 25190 (-)
Type: pfam
Location: 23904 - 25190 (-)
Gene ID: k141_39846_24
Type: pfam
Location: 25217 - 26977 (-)
Type: pfam
Location: 25217 - 26977 (-)
Gene ID: k141_39846_25
Type: TC
Location: 26996 - 30280 (-)
Type: TC
Location: 26996 - 30280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella oris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.