Genome Details
Selected Rep_genome_ID: CGMR067574
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR067574 | 1,851,184 | 93.33% | 2.5% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR067574_CGC22 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR067574_CGC19 | CGCFAM_00023 | Yes | 5 | 1 | |
| CGMR067574_CGC9 | CGCFAM_00028 | Yes | 5 | 3 | |
| CGMR067574_CGC10 | CGCFAM_00113 | Yes | 3 | 1 | |
| CGMR067574_CGC12 | CGCFAM_00128 | Yes | 10 | 4 | |
| CGMR067574_CGC21 | CGCFAM_00306 | Yes | 4 | 3 | |
| CGMR067574_CGC5 | CGCFAM_00476 | Yes | 7 | 2 | |
| CGMR067574_CGC20 | CGCFAM_00564 | Yes | 6 | 2 | |
| CGMR067574_CGC18 | CGCFAM_00900 | Yes | 4 | 3 | |
| CGMR067574_CGC17 | CGCFAM_01056 | Yes | 3 | 1 | |
| CGMR067574_CGC2 | CGCFAM_01478 | Yes | 6 | 3 | |
| CGMR067574_CGC14 | CGCFAM_02825 | Yes | 4 | 1 | |
| CGMR067574_CGC8 | CGCFAM_03162 | Yes | 3 | 2 | |
| CGMR067574_CGC23 | CGCFAM_03702 | Yes | 4 | 2 | |
| CGMR067574_CGC16 | CGCFAM_06747 | Yes | 6 | 3 | |
| CGMR067574_CGC15 | CGCFAM_08897 | Yes | 3 | 1 | |
| CGMR067574_CGC3 | CGCFAM_08898 | Yes | 3 | 1 |
Top CAZyme Families