Cluster: CGMR067574_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR067574
- CGC Family ID: CGCFAM_01478
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1529323 | k141_1529323_1 | 1 | 495 | + | GH154 |
| TC | k141_1529323 | k141_1529323_2 | 522 | 3584 | + | 1.B.14.6.1 |
| pfam | k141_1529323 | k141_1529323_3 | 3597 | 5222 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_1529323 | k141_1529323_4 | 5256 | 7094 | + | BACON | BACON |
| CAZyme | k141_1529323 | k141_1529323_5 | 7167 | 9794 | + | CBM57 | GH2 |
| CAZyme | k141_1529323 | k141_1529323_6 | 9815 | 11380 | + | GH50 |
Gene ID: k141_1529323_1
Type: CAZyme
Location: 1 - 495 (+)
Type: CAZyme
Location: 1 - 495 (+)
Gene ID: k141_1529323_2
Type: TC
Location: 522 - 3584 (+)
Type: TC
Location: 522 - 3584 (+)
Gene ID: k141_1529323_3
Type: pfam
Location: 3597 - 5222 (+)
Type: pfam
Location: 3597 - 5222 (+)
Gene ID: k141_1529323_4
Type: pfam
Location: 5256 - 7094 (+)
Type: pfam
Location: 5256 - 7094 (+)
Gene ID: k141_1529323_5
Type: CAZyme
Location: 7167 - 9794 (+)
Type: CAZyme
Location: 7167 - 9794 (+)
Gene ID: k141_1529323_6
Type: CAZyme
Location: 9815 - 11380 (+)
Type: CAZyme
Location: 9815 - 11380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.