Cluster: CGMR067574_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR067574
- CGC Family ID: CGCFAM_06747
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_942147 | k141_942147_17 | 19345 | 20694 | - | GH105 |
| TC | k141_942147 | k141_942147_18 | 20719 | 22302 | - | 2.A.21.3.19 |
| NULL(UNKNOWN) | k141_942147 | k141_942147_19 | 22346 | 23371 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_942147 | k141_942147_20 | 23379 | 25631 | - | GH31_3 |
| CAZyme | k141_942147 | k141_942147_21 | 25657 | 27504 | - | GH141 |
| TC | k141_942147 | k141_942147_22 | 27690 | 28331 | + | 2.A.88.8.1 |
Gene ID: k141_942147_17
Type: CAZyme
Location: 19345 - 20694 (-)
Type: CAZyme
Location: 19345 - 20694 (-)
Gene ID: k141_942147_18
Type: TC
Location: 20719 - 22302 (-)
Type: TC
Location: 20719 - 22302 (-)
Gene ID: k141_942147_19
Type:
Location: 22346 - 23371 (-)
Type:
Location: 22346 - 23371 (-)
Gene ID: k141_942147_20
Type: CAZyme
Location: 23379 - 25631 (-)
Type: CAZyme
Location: 23379 - 25631 (-)
Gene ID: k141_942147_21
Type: CAZyme
Location: 25657 - 27504 (-)
Type: CAZyme
Location: 25657 - 27504 (-)
Gene ID: k141_942147_22
Type: TC
Location: 27690 - 28331 (+)
Type: TC
Location: 27690 - 28331 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.