Cluster: CGMR067574_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067574
- CGC Family ID: CGCFAM_00023
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1418013 | k141_1418013_12 | 18963 | 20546 | - | 8.A.46.1.3 |
| TC | k141_1418013 | k141_1418013_13 | 20562 | 23648 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_1418013 | k141_1418013_14 | 23749 | 25686 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_1418013 | k141_1418013_15 | 25700 | 25855 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1418013 | k141_1418013_16 | 26010 | 27902 | - | CE20 |
Gene ID: k141_1418013_12
Type: TC
Location: 18963 - 20546 (-)
Type: TC
Location: 18963 - 20546 (-)
Gene ID: k141_1418013_13
Type: TC
Location: 20562 - 23648 (-)
Type: TC
Location: 20562 - 23648 (-)
Gene ID: k141_1418013_14
Type:
Location: 23749 - 25686 (-)
Type:
Location: 23749 - 25686 (-)
Gene ID: k141_1418013_15
Type:
Location: 25700 - 25855 (-)
Type:
Location: 25700 - 25855 (-)
Gene ID: k141_1418013_16
Type: CAZyme
Location: 26010 - 27902 (-)
Type: CAZyme
Location: 26010 - 27902 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.