Cluster: CGMR067574_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR067574
- CGC Family ID: CGCFAM_00476
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_106016 | k141_106016_16 | 20874 | 21734 | + | GT2 |
| CAZyme | k141_106016 | k141_106016_17 | 21768 | 22574 | + | GT2 |
| TC | k141_106016 | k141_106016_18 | 22806 | 24068 | - | 3.D.5.1.1 |
| TC | k141_106016 | k141_106016_19 | 24089 | 24697 | - | 3.D.5.1.1 |
| TC | k141_106016 | k141_106016_20 | 24709 | 25338 | - | 3.D.5.1.1 |
| pfam | k141_106016 | k141_106016_21 | 25331 | 26047 | - | FMN_bind |
| TC | k141_106016 | k141_106016_22 | 26056 | 27189 | - | 3.D.5.1.1 |
Gene ID: k141_106016_16
Type: CAZyme
Location: 20874 - 21734 (+)
Type: CAZyme
Location: 20874 - 21734 (+)
Gene ID: k141_106016_17
Type: CAZyme
Location: 21768 - 22574 (+)
Type: CAZyme
Location: 21768 - 22574 (+)
Gene ID: k141_106016_18
Type: TC
Location: 22806 - 24068 (-)
Type: TC
Location: 22806 - 24068 (-)
Gene ID: k141_106016_19
Type: TC
Location: 24089 - 24697 (-)
Type: TC
Location: 24089 - 24697 (-)
Gene ID: k141_106016_20
Type: TC
Location: 24709 - 25338 (-)
Type: TC
Location: 24709 - 25338 (-)
Gene ID: k141_106016_21
Type: pfam
Location: 25331 - 26047 (-)
Type: pfam
Location: 25331 - 26047 (-)
Gene ID: k141_106016_22
Type: TC
Location: 26056 - 27189 (-)
Type: TC
Location: 26056 - 27189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.