Genome Details
Selected Rep_genome_ID: C19.CMAG_4
Total Genomes Found: 11
Total Genomes Found: 11
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG151_maxbin.001_sub | 2,373,714 | 98.66% | 0.34% | NA | Africa | H3AfricaPhase2 |
| C19.CMAG_4 | 2,490,814 | 98.66% | 0.34% | China(Inner Mongolia) | Asia | IMGG |
| CGMR073348 | 2,058,310 | 98.66% | 0.34% | China | Asia | CGMR |
| GCA_021617015.1_ASM2161701v1_genomic | 2,022,777 | 95.97% | 0.34% | NA | Africa | H3AfricaPhase1 |
| GCA_021625315.1_ASM2162531v1_genomic | 1,945,728 | 92.95% | 0.34% | NA | Africa | H3AfricaPhase1 |
| GCA_021626945.1_ASM2162694v1_genomic | 2,114,202 | 97.99% | 1.01% | NA | Africa | H3AfricaPhase1 |
| GCA_021627685.1_ASM2162768v1_genomic | 1,942,097 | 98.66% | 1.01% | NA | Africa | H3AfricaPhase1 |
| GCA_021628915.1_ASM2162891v1_genomic | 2,061,009 | 95.97% | 2.35% | NA | Africa | H3AfricaPhase1 |
| GCA_021630445.1_ASM2163044v1_genomic | 2,312,909 | 98.66% | 1.01% | NA | Africa | H3AfricaPhase1 |
| GCA_021632985.1_ASM2163298v1_genomic | 2,243,411 | 98.66% | 0.34% | NA | Africa | H3AfricaPhase1 |
| GCA_021633385.1_ASM2163338v1_genomic | 1,922,730 | 94.52% | 1.01% | NA | Africa | H3AfricaPhase1 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C19.CMAG_4_CGC3 | CGCFAM_00006 | Yes | 11 | 7 | |
| C19.CMAG_4_CGC4 | CGCFAM_00619 | Yes | 5 | 1 | |
| C19.CMAG_4_CGC1 | CGCFAM_01735 | Yes | 4 | 1 | |
| C19.CMAG_4_CGC9 | CGCFAM_01876 | Yes | 4 | 1 | |
| C19.CMAG_4_CGC8 | CGCFAM_02144 | Yes | 6 | 1 | |
| C19.CMAG_4_CGC2 | CGCFAM_03648 | Yes | 3 | 1 | |
| C19.CMAG_4_CGC15 | CGCFAM_05223 | Yes | 4 | 1 | |
| C19.CMAG_4_CGC12 | CGCFAM_07838 | Yes | 8 | 2 |
Top CAZyme Families