Cluster: C19.CMAG_4_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.CMAG_4
- CGC Family ID: CGCFAM_00619
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_1058 | C19_contig_1058_454 | 476364 | 477437 | - | 3.A.1.11.7 |
| TC | C19_contig_1058 | C19_contig_1058_455 | 477464 | 478255 | - | 3.A.1.11.7 |
| TC | C19_contig_1058 | C19_contig_1058_456 | 478255 | 479046 | - | 3.A.1.11.8 |
| TC | C19_contig_1058 | C19_contig_1058_457 | 479049 | 480464 | - | 3.A.1.11.8 |
| CAZyme | C19_contig_1058 | C19_contig_1058_458 | 480894 | 484004 | + | GH13_28 |
Gene ID: C19_contig_1058_454
Type: TC
Location: 476364 - 477437 (-)
Type: TC
Location: 476364 - 477437 (-)
Gene ID: C19_contig_1058_455
Type: TC
Location: 477464 - 478255 (-)
Type: TC
Location: 477464 - 478255 (-)
Gene ID: C19_contig_1058_456
Type: TC
Location: 478255 - 479046 (-)
Type: TC
Location: 478255 - 479046 (-)
Gene ID: C19_contig_1058_457
Type: TC
Location: 479049 - 480464 (-)
Type: TC
Location: 479049 - 480464 (-)
Gene ID: C19_contig_1058_458
Type: CAZyme
Location: 480894 - 484004 (+)
Type: CAZyme
Location: 480894 - 484004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.