Cluster: C19.CMAG_4_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: C19.CMAG_4
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_1058 | C19_contig_1058_384 | 402810 | 403436 | + | 9.B.18.1.3 |
| CAZyme | C19_contig_1058 | C19_contig_1058_385 | 403426 | 404520 | + | GT4 |
| CAZyme | C19_contig_1058 | C19_contig_1058_386 | 404545 | 405636 | + | GT4 |
| CAZyme | C19_contig_1058 | C19_contig_1058_387 | 405639 | 406547 | + | GT2 |
| pfam | C19_contig_1058 | C19_contig_1058_388 | 406551 | 407681 | + | EpsG |
| NULL(UNKNOWN) | C19_contig_1058 | C19_contig_1058_389 | 407703 | 408242 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C19_contig_1058 | C19_contig_1058_390 | 408268 | 408948 | + | GT32 |
| pfam | C19_contig_1058 | C19_contig_1058_391 | 408951 | 409499 | + | Hexapep | Hexapep_2 |
| CAZyme | C19_contig_1058 | C19_contig_1058_392 | 409496 | 410689 | + | GT4 |
| CAZyme | C19_contig_1058 | C19_contig_1058_393 | 410710 | 411714 | + | GT2 |
| CAZyme | C19_contig_1058 | C19_contig_1058_394 | 411727 | 412704 | + | GT2 |
Gene ID: C19_contig_1058_384
Type: TC
Location: 402810 - 403436 (+)
Type: TC
Location: 402810 - 403436 (+)
Gene ID: C19_contig_1058_385
Type: CAZyme
Location: 403426 - 404520 (+)
Type: CAZyme
Location: 403426 - 404520 (+)
Gene ID: C19_contig_1058_386
Type: CAZyme
Location: 404545 - 405636 (+)
Type: CAZyme
Location: 404545 - 405636 (+)
Gene ID: C19_contig_1058_387
Type: CAZyme
Location: 405639 - 406547 (+)
Type: CAZyme
Location: 405639 - 406547 (+)
Gene ID: C19_contig_1058_388
Type: pfam
Location: 406551 - 407681 (+)
Type: pfam
Location: 406551 - 407681 (+)
Gene ID: C19_contig_1058_389
Type:
Location: 407703 - 408242 (+)
Type:
Location: 407703 - 408242 (+)
Gene ID: C19_contig_1058_390
Type: CAZyme
Location: 408268 - 408948 (+)
Type: CAZyme
Location: 408268 - 408948 (+)
Gene ID: C19_contig_1058_391
Type: pfam
Location: 408951 - 409499 (+)
Type: pfam
Location: 408951 - 409499 (+)
Gene ID: C19_contig_1058_392
Type: CAZyme
Location: 409496 - 410689 (+)
Type: CAZyme
Location: 409496 - 410689 (+)
Gene ID: C19_contig_1058_393
Type: CAZyme
Location: 410710 - 411714 (+)
Type: CAZyme
Location: 410710 - 411714 (+)
Gene ID: C19_contig_1058_394
Type: CAZyme
Location: 411727 - 412704 (+)
Type: CAZyme
Location: 411727 - 412704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.