Cluster: C19.CMAG_4_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C19.CMAG_4
- CGC Family ID: CGCFAM_01876
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_1058 | C19_contig_1058_1437 | 1505847 | 1508147 | - | GT4 |
| pfam | C19_contig_1058 | C19_contig_1058_1438 | 1508229 | 1509239 | - | Stealth_CR2 | Stealth_CR1 |
| pfam | C19_contig_1058 | C19_contig_1058_1439 | 1509247 | 1510449 | - | Glyphos_transf |
| TC | C19_contig_1058 | C19_contig_1058_1440 | 1510459 | 1511190 | - | 3.A.1.103.4 |
Gene ID: C19_contig_1058_1437
Type: CAZyme
Location: 1505847 - 1508147 (-)
Type: CAZyme
Location: 1505847 - 1508147 (-)
Gene ID: C19_contig_1058_1438
Type: pfam
Location: 1508229 - 1509239 (-)
Type: pfam
Location: 1508229 - 1509239 (-)
Gene ID: C19_contig_1058_1439
Type: pfam
Location: 1509247 - 1510449 (-)
Type: pfam
Location: 1509247 - 1510449 (-)
Gene ID: C19_contig_1058_1440
Type: TC
Location: 1510459 - 1511190 (-)
Type: TC
Location: 1510459 - 1511190 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp003438075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.