Genome Details
Selected Rep_genome_ID: C134.bin_6
Total Genomes Found: 33
Total Genomes Found: 33
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG283_40 | 5,275,028 | 99.25% | 0% | NA | Africa | H3AfricaPhase2 |
| C134.bin_6 | 4,955,583 | 99.25% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR025245 | 5,055,653 | 99.25% | 0.19% | China | Asia | CGMR |
| CGMR063003 | 4,547,079 | 99.1% | 0% | China | Asia | CGMR |
| GCA_021619645.1_ASM2161964v1_genomic | 5,281,287 | 98.29% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021622705.1_ASM2162270v1_genomic | 5,202,446 | 99.25% | 0.13% | NA | Africa | H3AfricaPhase1 |
| Rep_449 | 4,843,234 | 99.2481% | 0% | NA | NA | WIS |
| SPMP02_bin.13 | 4,486,266 | 96.97% | 0.19% | Singapore | Asia | SPMP |
| SPMP08_bin.45 | 4,604,015 | 95.8% | 0.4% | Singapore | Asia | SPMP |
| SPMP107_bin.45 | 4,659,862 | 97.13% | 1.42% | Singapore | Asia | SPMP |
| SPMP11_bin.79 | 4,585,679 | 97.18% | 0.56% | Singapore | Asia | SPMP |
| SPMP17_bin.56 | 4,693,227 | 95.36% | 1.02% | Singapore | Asia | SPMP |
| SPMP22_bin.48 | 4,653,978 | 96.81% | 4.59% | Singapore | Asia | SPMP |
| SPMP27_bin.76 | 4,048,190 | 98.26% | 1.5% | Singapore | Asia | SPMP |
| SPMP32_bin.40 | 4,911,672 | 98.25% | 0.19% | Singapore | Asia | SPMP |
| SPMP36_bin.10 | 4,620,912 | 96.42% | 3.52% | Singapore | Asia | SPMP |
| SPMP37_bin.63 | 5,417,582 | 98.2% | 4.7% | Singapore | Asia | SPMP |
| SPMP39_bin.129 | 4,231,696 | 98.68% | 0.57% | Singapore | Asia | SPMP |
| SPMP42_bin.28 | 5,006,754 | 97.74% | 0.19% | Singapore | Asia | SPMP |
| SPMP45_bin.189 | 5,019,347 | 97.34% | 3.13% | Singapore | Asia | SPMP |
| SPMP46_bin.57 | 4,141,091 | 93.18% | 0.82% | Singapore | Asia | SPMP |
| SPMP56_bin.23 | 4,528,261 | 95.14% | 3.05% | Singapore | Asia | SPMP |
| SPMP57_bin.82 | 4,110,602 | 94.67% | 0.75% | Singapore | Asia | SPMP |
| SPMP63_bin.50 | 4,514,894 | 96.37% | 0.94% | Singapore | Asia | SPMP |
| SPMP67_bin.7 | 4,796,055 | 96.82% | 2.08% | Singapore | Asia | SPMP |
| SPMP69_bin.21 | 4,180,607 | 96.65% | 3.02% | Singapore | Asia | SPMP |
| SPMP75_bin.34 | 4,649,192 | 95.4% | 2.87% | Singapore | Asia | SPMP |
| SPMP84_bin.39 | 5,025,948 | 97.34% | 3.16% | Singapore | Asia | SPMP |
| SPMP87_bin.15 | 4,733,885 | 96.99% | 3.73% | Singapore | Asia | SPMP |
| SPMP90_bin.44 | 4,722,543 | 97.84% | 4.37% | Singapore | Asia | SPMP |
| SPMP92_bin.16 | 4,598,071 | 97.22% | 0.38% | Singapore | Asia | SPMP |
| SPMP94_bin.46 | 5,785,127 | 98.75% | 2.82% | Singapore | Asia | SPMP |
| SPMP95_bin.33 | 5,062,257 | 97.62% | 1.13% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C134.bin_6_CGC74 | CGCFAM_04737 | Yes | 21 | 16 | |
| C134.bin_6_CGC31 | CGCFAM_05199 | Yes | 3 | 1 | |
| C134.bin_6_CGC33 | CGCFAM_05200 | Yes | 38 | 18 | |
| C134.bin_6_CGC56 | CGCFAM_05201 | Yes | 9 | 2 | |
| PUL0093_C134.bin_6_C0 | CGCFAM_06432 | Yes | 23 | 7 | host glycan |
| C134.bin_6_CGC14 | CGCFAM_07914 | Yes | 10 | 4 | |
| C134.bin_6_CGC34 | CGCFAM_07915 | Yes | 10 | 5 | |
| C134.bin_6_CGC60 | CGCFAM_07917 | Yes | 4 | 1 |
Top CAZyme Families