Cluster: PUL0093_C134.bin_6_C0
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 7
- Substrate: host glycan
- Genome ID: C134.bin_6
- CGC Family ID: CGCFAM_06432
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3559 | 4350988 | 4352118 | + | CE20 |
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3560 | 4352145 | 4354712 | + | GH2 |
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3561 | 4354729 | 4357053 | + | CBM32 | GH20 |
| pfam | PUL0093_C134.bin_6_C0 | C134_contig_431_3562 | 4357144 | 4358367 | + | Kelch_1 | Kelch_2 | Kelch_HCF | NANM | NANM |
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3563 | 4358364 | 4360418 | + | GH20 |
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3564 | 4360445 | 4362697 | + | GH92 |
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3565 | 4362700 | 4365204 | + | GH2 |
| CAZyme | PUL0093_C134.bin_6_C0 | C134_contig_431_3566 | 4365379 | 4366542 | + | CE9 |
| TF | PUL0093_C134.bin_6_C0 | C134_contig_431_3567 | 4366611 | 4367312 | - | Trans_reg_C |
| STP | PUL0093_C134.bin_6_C0 | C134_contig_431_3568 | 4367335 | 4368825 | - | HATPase_c |
| pfam | PUL0093_C134.bin_6_C0 | C134_contig_431_3569 | 4368939 | 4369805 | + | Porph_ging |
| TC | PUL0093_C134.bin_6_C0 | C134_contig_431_3570 | 4369810 | 4372470 | + | 1.C.105.2.12 |
| TC | PUL0093_C134.bin_6_C0 | C134_contig_431_3571 | 4372442 | 4373203 | - | 3.A.1.128.2 |
| NULL(UNKNOWN) | PUL0093_C134.bin_6_C0 | C134_contig_431_3572 | 4373200 | 4374129 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | PUL0093_C134.bin_6_C0 | C134_contig_431_3575 | 4375423 | 4376094 | - | NULL(UNKNOWN) |
| pfam | PUL0093_C134.bin_6_C0 | C134_contig_431_3577 | 4377422 | 4378789 | - | OEP | OEP |
| TC | PUL0093_C134.bin_6_C0 | C134_contig_431_3578 | 4378834 | 4381959 | - | 2.A.6.2.37 |
| pfam | PUL0093_C134.bin_6_C0 | C134_contig_431_3579 | 4381959 | 4383026 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TF | PUL0093_C134.bin_6_C0 | C134_contig_431_3580 | 4383204 | 4384082 | + | HTH_AraC |
| pfam | PUL0093_C134.bin_6_C0 | C134_contig_431_3581 | 4384148 | 4384912 | + | DUF2400 |
| STP | PUL0093_C134.bin_6_C0 | C134_contig_431_3582 | 4385088 | 4387076 | - | PIG-L |
| sulfatase | PUL0093_C134.bin_6_C0 | C134_contig_431_3583 | 4387080 | 4387871 | - | S1_9 |
| TC | PUL0093_C134.bin_6_C0 | C134_contig_431_3584 | 4387917 | 4389152 | - | 2.A.1.14.14 |
Gene ID: C134_contig_431_3559
Type: CAZyme
Location: 4350988 - 4352118 (+)
Type: CAZyme
Location: 4350988 - 4352118 (+)
Gene ID: C134_contig_431_3560
Type: CAZyme
Location: 4352145 - 4354712 (+)
Type: CAZyme
Location: 4352145 - 4354712 (+)
Gene ID: C134_contig_431_3561
Type: CAZyme
Location: 4354729 - 4357053 (+)
Type: CAZyme
Location: 4354729 - 4357053 (+)
Gene ID: C134_contig_431_3562
Type: pfam
Location: 4357144 - 4358367 (+)
Type: pfam
Location: 4357144 - 4358367 (+)
Gene ID: C134_contig_431_3563
Type: CAZyme
Location: 4358364 - 4360418 (+)
Type: CAZyme
Location: 4358364 - 4360418 (+)
Gene ID: C134_contig_431_3564
Type: CAZyme
Location: 4360445 - 4362697 (+)
Type: CAZyme
Location: 4360445 - 4362697 (+)
Gene ID: C134_contig_431_3565
Type: CAZyme
Location: 4362700 - 4365204 (+)
Type: CAZyme
Location: 4362700 - 4365204 (+)
Gene ID: C134_contig_431_3566
Type: CAZyme
Location: 4365379 - 4366542 (+)
Type: CAZyme
Location: 4365379 - 4366542 (+)
Gene ID: C134_contig_431_3567
Type: TF
Location: 4366611 - 4367312 (-)
Type: TF
Location: 4366611 - 4367312 (-)
Gene ID: C134_contig_431_3568
Type: STP
Location: 4367335 - 4368825 (-)
Type: STP
Location: 4367335 - 4368825 (-)
Gene ID: C134_contig_431_3569
Type: pfam
Location: 4368939 - 4369805 (+)
Type: pfam
Location: 4368939 - 4369805 (+)
Gene ID: C134_contig_431_3570
Type: TC
Location: 4369810 - 4372470 (+)
Type: TC
Location: 4369810 - 4372470 (+)
Gene ID: C134_contig_431_3571
Type: TC
Location: 4372442 - 4373203 (-)
Type: TC
Location: 4372442 - 4373203 (-)
Gene ID: C134_contig_431_3572
Type: null
Location: 4373200 - 4374129 (-)
Type: null
Location: 4373200 - 4374129 (-)
Gene ID: C134_contig_431_3575
Type: null
Location: 4375423 - 4376094 (-)
Type: null
Location: 4375423 - 4376094 (-)
Gene ID: C134_contig_431_3577
Type: pfam
Location: 4377422 - 4378789 (-)
Type: pfam
Location: 4377422 - 4378789 (-)
Gene ID: C134_contig_431_3578
Type: TC
Location: 4378834 - 4381959 (-)
Type: TC
Location: 4378834 - 4381959 (-)
Gene ID: C134_contig_431_3579
Type: pfam
Location: 4381959 - 4383026 (-)
Type: pfam
Location: 4381959 - 4383026 (-)
Gene ID: C134_contig_431_3580
Type: TF
Location: 4383204 - 4384082 (+)
Type: TF
Location: 4383204 - 4384082 (+)
Gene ID: C134_contig_431_3581
Type: pfam
Location: 4384148 - 4384912 (+)
Type: pfam
Location: 4384148 - 4384912 (+)
Gene ID: C134_contig_431_3582
Type: STP
Location: 4385088 - 4387076 (-)
Type: STP
Location: 4385088 - 4387076 (-)
Gene ID: C134_contig_431_3583
Type: sulfatase
Location: 4387080 - 4387871 (-)
Type: sulfatase
Location: 4387080 - 4387871 (-)
Gene ID: C134_contig_431_3584
Type: TC
Location: 4387917 - 4389152 (-)
Type: TC
Location: 4387917 - 4389152 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Composition
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