Cluster: C134.bin_6_CGC74
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 16
- Substrate:
- Genome ID: C134.bin_6
- CGC Family ID: CGCFAM_04737
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C134_contig_431 | C134_contig_431_3715 | 4542162 | 4543367 | - | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3716 | 4543364 | 4544482 | - | GT4 |
| CAZyme | C134_contig_431 | C134_contig_431_3717 | 4544489 | 4545331 | - | GT2 |
| pfam | C134_contig_431 | C134_contig_431_3718 | 4545315 | 4546097 | - | MetW | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | C134_contig_431 | C134_contig_431_3719 | 4546094 | 4547293 | - | GT4 |
| NULL(UNKNOWN) | C134_contig_431 | C134_contig_431_3720 | 4547254 | 4548387 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C134_contig_431 | C134_contig_431_3721 | 4548384 | 4549535 | - | GT4 |
| CAZyme | C134_contig_431 | C134_contig_431_3722 | 4549532 | 4550677 | - | GT4 |
| CAZyme | C134_contig_431 | C134_contig_431_3723 | 4550906 | 4551931 | + | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3724 | 4551952 | 4552902 | - | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3725 | 4553515 | 4554696 | + | GT4 |
| TC | C134_contig_431 | C134_contig_431_3726 | 4554683 | 4555546 | + | 3.A.1.103.5 |
| TC | C134_contig_431 | C134_contig_431_3727 | 4555560 | 4556831 | + | 3.A.1.103.5 |
| CAZyme | C134_contig_431 | C134_contig_431_3728 | 4556853 | 4557764 | + | GT23 |
| CAZyme | C134_contig_431 | C134_contig_431_3729 | 4557785 | 4558600 | + | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3730 | 4558618 | 4559565 | - | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3731 | 4559569 | 4560393 | - | GT111 |
| pfam | C134_contig_431 | C134_contig_431_3732 | 4560378 | 4560989 | - | Hexapep | Hexapep_2 |
| CAZyme | C134_contig_431 | C134_contig_431_3733 | 4560994 | 4562154 | - | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3734 | 4562162 | 4563286 | - | GT2 |
| CAZyme | C134_contig_431 | C134_contig_431_3735 | 4563283 | 4564188 | - | GT2 |
Gene ID: C134_contig_431_3715
Type: CAZyme
Location: 4542162 - 4543367 (-)
Type: CAZyme
Location: 4542162 - 4543367 (-)
Gene ID: C134_contig_431_3716
Type: CAZyme
Location: 4543364 - 4544482 (-)
Type: CAZyme
Location: 4543364 - 4544482 (-)
Gene ID: C134_contig_431_3717
Type: CAZyme
Location: 4544489 - 4545331 (-)
Type: CAZyme
Location: 4544489 - 4545331 (-)
Gene ID: C134_contig_431_3718
Type: pfam
Location: 4545315 - 4546097 (-)
Type: pfam
Location: 4545315 - 4546097 (-)
Gene ID: C134_contig_431_3719
Type: CAZyme
Location: 4546094 - 4547293 (-)
Type: CAZyme
Location: 4546094 - 4547293 (-)
Gene ID: C134_contig_431_3720
Type:
Location: 4547254 - 4548387 (-)
Type:
Location: 4547254 - 4548387 (-)
Gene ID: C134_contig_431_3721
Type: CAZyme
Location: 4548384 - 4549535 (-)
Type: CAZyme
Location: 4548384 - 4549535 (-)
Gene ID: C134_contig_431_3722
Type: CAZyme
Location: 4549532 - 4550677 (-)
Type: CAZyme
Location: 4549532 - 4550677 (-)
Gene ID: C134_contig_431_3723
Type: CAZyme
Location: 4550906 - 4551931 (+)
Type: CAZyme
Location: 4550906 - 4551931 (+)
Gene ID: C134_contig_431_3724
Type: CAZyme
Location: 4551952 - 4552902 (-)
Type: CAZyme
Location: 4551952 - 4552902 (-)
Gene ID: C134_contig_431_3725
Type: CAZyme
Location: 4553515 - 4554696 (+)
Type: CAZyme
Location: 4553515 - 4554696 (+)
Gene ID: C134_contig_431_3726
Type: TC
Location: 4554683 - 4555546 (+)
Type: TC
Location: 4554683 - 4555546 (+)
Gene ID: C134_contig_431_3727
Type: TC
Location: 4555560 - 4556831 (+)
Type: TC
Location: 4555560 - 4556831 (+)
Gene ID: C134_contig_431_3728
Type: CAZyme
Location: 4556853 - 4557764 (+)
Type: CAZyme
Location: 4556853 - 4557764 (+)
Gene ID: C134_contig_431_3729
Type: CAZyme
Location: 4557785 - 4558600 (+)
Type: CAZyme
Location: 4557785 - 4558600 (+)
Gene ID: C134_contig_431_3730
Type: CAZyme
Location: 4558618 - 4559565 (-)
Type: CAZyme
Location: 4558618 - 4559565 (-)
Gene ID: C134_contig_431_3731
Type: CAZyme
Location: 4559569 - 4560393 (-)
Type: CAZyme
Location: 4559569 - 4560393 (-)
Gene ID: C134_contig_431_3732
Type: pfam
Location: 4560378 - 4560989 (-)
Type: pfam
Location: 4560378 - 4560989 (-)
Gene ID: C134_contig_431_3733
Type: CAZyme
Location: 4560994 - 4562154 (-)
Type: CAZyme
Location: 4560994 - 4562154 (-)
Gene ID: C134_contig_431_3734
Type: CAZyme
Location: 4562162 - 4563286 (-)
Type: CAZyme
Location: 4562162 - 4563286 (-)
Gene ID: C134_contig_431_3735
Type: CAZyme
Location: 4563283 - 4564188 (-)
Type: CAZyme
Location: 4563283 - 4564188 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.