Cluster: C134.bin_6_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: C134.bin_6
- CGC Family ID: CGCFAM_07914
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C134_contig_431 | C134_contig_431_1002 | 1100541 | 1102064 | - | 9.B.160.1.10 |
| pfam | C134_contig_431 | C134_contig_431_1003 | 1102387 | 1102974 | - | DUF417 |
| TF | C134_contig_431 | C134_contig_431_1004 | 1103070 | 1103906 | - | 0035607 |
| TC | C134_contig_431 | C134_contig_431_1005 | 1104244 | 1107381 | + | 2.A.21.9.2 |
| CAZyme | C134_contig_431 | C134_contig_431_1006 | 1107844 | 1109184 | - | CE19 |
| CAZyme | C134_contig_431 | C134_contig_431_1007 | 1109193 | 1110524 | - | GH28 |
| CAZyme | C134_contig_431 | C134_contig_431_1008 | 1110591 | 1113344 | - | CBM67 | GH78 |
| CAZyme | C134_contig_431 | C134_contig_431_1009 | 1113396 | 1116707 | - | GH142 | GH143 |
| NULL(UNKNOWN) | C134_contig_431 | C134_contig_431_1010 | 1117027 | 1119138 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C134_contig_431 | C134_contig_431_1011 | 1119219 | 1121552 | - | 1.B.14.1.4 |
Gene ID: C134_contig_431_1002
Type: TC
Location: 1100541 - 1102064 (-)
Type: TC
Location: 1100541 - 1102064 (-)
Gene ID: C134_contig_431_1003
Type: pfam
Location: 1102387 - 1102974 (-)
Type: pfam
Location: 1102387 - 1102974 (-)
Gene ID: C134_contig_431_1004
Type: TF
Location: 1103070 - 1103906 (-)
Type: TF
Location: 1103070 - 1103906 (-)
Gene ID: C134_contig_431_1005
Type: TC
Location: 1104244 - 1107381 (+)
Type: TC
Location: 1104244 - 1107381 (+)
Gene ID: C134_contig_431_1006
Type: CAZyme
Location: 1107844 - 1109184 (-)
Type: CAZyme
Location: 1107844 - 1109184 (-)
Gene ID: C134_contig_431_1007
Type: CAZyme
Location: 1109193 - 1110524 (-)
Type: CAZyme
Location: 1109193 - 1110524 (-)
Gene ID: C134_contig_431_1008
Type: CAZyme
Location: 1110591 - 1113344 (-)
Type: CAZyme
Location: 1110591 - 1113344 (-)
Gene ID: C134_contig_431_1009
Type: CAZyme
Location: 1113396 - 1116707 (-)
Type: CAZyme
Location: 1113396 - 1116707 (-)
Gene ID: C134_contig_431_1010
Type:
Location: 1117027 - 1119138 (+)
Type:
Location: 1117027 - 1119138 (+)
Gene ID: C134_contig_431_1011
Type: TC
Location: 1119219 - 1121552 (-)
Type: TC
Location: 1119219 - 1121552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.