Genome Details
Selected Rep_genome_ID: B50.CMAG_3
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia sp001808955
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B50.CMAG_3 | 2,269,745 | 99.33% | 0% | China(Inner Mongolia) | Asia | IMGG |
| HRGMv2_0064 | 2,295,428 | 99.33% | 0% | United Kingdom | Europe | HRGM |
| MGYG000000307 | 2,184,222 | 94.67% | 0.67% | Sweden | Europe | UHGG |
| MGYG000001269 | 2,178,797 | 97.11% | 0.33% | Italy | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| B50.CMAG_3_CGC6 | CGCFAM_00013 | Yes | 4 | 1 | |
| B50.CMAG_3_CGC17 | CGCFAM_00022 | Yes | 3 | 1 | |
| B50.CMAG_3_CGC2 | CGCFAM_00126 | Yes | 6 | 1 | |
| B50.CMAG_3_CGC5 | CGCFAM_00140 | Yes | 3 | 1 | |
| B50.CMAG_3_CGC4 | CGCFAM_01702 | Yes | 6 | 1 | |
| B50.CMAG_3_CGC11 | CGCFAM_02619 | Yes | 5 | 1 | |
| B50.CMAG_3_CGC14 | CGCFAM_02620 | Yes | 3 | 1 | |
| B50.CMAG_3_CGC9 | CGCFAM_02621 | Yes | 8 | 3 | |
| B50.CMAG_3_CGC7 | CGCFAM_03392 | Yes | 8 | 4 | |
| B50.CMAG_3_CGC12 | CGCFAM_03449 | Yes | 9 | 3 | |
| B50.CMAG_3_CGC16 | CGCFAM_04955 | Yes | 7 | 1 | |
| B50.CMAG_3_CGC3 | CGCFAM_04956 | Yes | 3 | 1 | |
| B50.CMAG_3_CGC15 | CGCFAM_07522 | Yes | 4 | 1 | |
| B50.CMAG_3_CGC18 | CGCFAM_07523 | Yes | 4 | 2 |
Top CAZyme Families