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Cluster: B50.CMAG_3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B50_contig_4164 B50_contig_4164_1539 2035757 2036452 + 1.C.82.1.1
TC B50_contig_4164 B50_contig_4164_1540 2036756 2037730 + 2.A.16.1.1
TC B50_contig_4164 B50_contig_4164_1541 2037832 2038971 + 3.A.1.11.6
pfam B50_contig_4164 B50_contig_4164_1542 2039360 2039890 + Ribosomal_L10
pfam B50_contig_4164 B50_contig_4164_1543 2040047 2040421 + Ribosomal_L12 | Ribosomal_L12_N
CAZyme B50_contig_4164 B50_contig_4164_1544 2040747 2042288 + GH32
TC B50_contig_4164 B50_contig_4164_1545 2042528 2044525 + 4.A.1.2.12
Gene ID: B50_contig_4164_1539
Type: TC
Location: 2035757 - 2036452 (+)
Gene ID: B50_contig_4164_1540
Type: TC
Location: 2036756 - 2037730 (+)
Gene ID: B50_contig_4164_1541
Type: TC
Location: 2037832 - 2038971 (+)
Gene ID: B50_contig_4164_1542
Type: pfam
Location: 2039360 - 2039890 (+)
Gene ID: B50_contig_4164_1543
Type: pfam
Location: 2040047 - 2040421 (+)
Gene ID: B50_contig_4164_1544
Type: CAZyme
Location: 2040747 - 2042288 (+)
Gene ID: B50_contig_4164_1545
Type: TC
Location: 2042528 - 2044525 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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