Genome Details
Selected Rep_genome_ID: AG427_4
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG427_4 | 3,141,822 | 97.96% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG427_4_CGC32 | CGCFAM_00013 | Yes | 5 | 1 | |
| AG427_4_CGC21 | CGCFAM_00875 | Yes | 6 | 2 | |
| AG427_4_CGC10 | CGCFAM_00894 | Yes | 24 | 13 | |
| AG427_4_CGC36 | CGCFAM_01008 | Yes | 5 | 1 | |
| AG427_4_CGC17 | CGCFAM_01178 | Yes | 10 | 1 | |
| AG427_4_CGC29 | CGCFAM_01179 | Yes | 4 | 1 | |
| AG427_4_CGC4 | CGCFAM_01239 | Yes | 15 | 4 | host glycan |
| AG427_4_CGC15 | CGCFAM_01284 | Yes | 15 | 8 | |
| AG427_4_CGC37 | CGCFAM_01380 | Yes | 4 | 2 | |
| AG427_4_CGC2 | CGCFAM_01384 | Yes | 11 | 3 | |
| AG427_4_CGC11 | CGCFAM_02035 | Yes | 10 | 2 | |
| AG427_4_CGC26 | CGCFAM_02036 | Yes | 4 | 1 | |
| AG427_4_CGC14 | CGCFAM_02549 | Yes | 14 | 6 | |
| AG427_4_CGC30 | CGCFAM_02550 | Yes | 5 | 1 | |
| AG427_4_CGC35 | CGCFAM_02551 | Yes | 7 | 1 | |
| AG427_4_CGC20 | CGCFAM_03333 | Yes | 3 | 1 | |
| AG427_4_CGC27 | CGCFAM_03334 | Yes | 4 | 1 | |
| AG427_4_CGC9 | CGCFAM_03335 | Yes | 4 | 1 | |
| AG427_4_CGC18 | CGCFAM_04762 | Yes | 5 | 1 | |
| AG427_4_CGC23 | CGCFAM_04764 | Yes | 14 | 1 | |
| AG427_4_CGC24 | CGCFAM_04765 | Yes | 6 | 2 | |
| AG427_4_CGC33 | CGCFAM_04767 | Yes | 6 | 1 | |
| AG427_4_CGC6 | CGCFAM_04768 | Yes | 5 | 2 | |
| AG427_4_CGC8 | CGCFAM_04769 | Yes | 4 | 1 | |
| AG427_4_CGC12 | CGCFAM_07258 | Yes | 8 | 1 |
Top CAZyme Families