Cluster: AG427_4_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: AG427_4
- CGC Family ID: CGCFAM_00013
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_21198 | k141_21198_16 | 16655 | 17758 | + | 9.B.146.1.6 |
| pfam | k141_21198 | k141_21198_17 | 17766 | 19076 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| pfam | k141_21198 | k141_21198_18 | 19054 | 19911 | + | LysM | LysM |
| TC | k141_21198 | k141_21198_19 | 19939 | 21081 | + | 2.A.103.1.1 |
| CAZyme | k141_21198 | k141_21198_20 | 21078 | 22202 | + | GT28 |
Gene ID: k141_21198_16
Type: TC
Location: 16655 - 17758 (+)
Type: TC
Location: 16655 - 17758 (+)
Gene ID: k141_21198_17
Type: pfam
Location: 17766 - 19076 (+)
Type: pfam
Location: 17766 - 19076 (+)
Gene ID: k141_21198_18
Type: pfam
Location: 19054 - 19911 (+)
Type: pfam
Location: 19054 - 19911 (+)
Gene ID: k141_21198_19
Type: TC
Location: 19939 - 21081 (+)
Type: TC
Location: 19939 - 21081 (+)
Gene ID: k141_21198_20
Type: CAZyme
Location: 21078 - 22202 (+)
Type: CAZyme
Location: 21078 - 22202 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_21198_16 | vegetarian > omnivore | 2.67540 | 0.04819 |
| k141_21198_16 | vegetarian > vegan | 1.52434 | 0.01794 |