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Cluster: AG427_4_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_70114 k141_70114_22 30334 31986 + GH29
pfam k141_70114 k141_70114_23 32011 34323 + BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | Nlig-Ia
TC k141_70114 k141_70114_24 34743 35351 + 4.F.1.1.8
NULL(UNKNOWN) k141_70114 k141_70114_25 35595 36845 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_70114 k141_70114_26 37441 38706 + 1.I.1.1.3
NULL(UNKNOWN) k141_70114 k141_70114_27 38843 39448 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_70114 k141_70114_28 39969 41414 + GH109
CAZyme k141_70114 k141_70114_29 41868 44252 - GH95
NULL(UNKNOWN) k141_70114 k141_70114_30 44472 45614 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase k141_70114 k141_70114_31 45611 46570 + M28.UPE
TC k141_70114 k141_70114_32 46618 47769 - 2.A.1.26.1
Gene ID: k141_70114_22
Type: CAZyme
Location: 30334 - 31986 (+)
Gene ID: k141_70114_23
Type: pfam
Location: 32011 - 34323 (+)
Gene ID: k141_70114_24
Type: TC
Location: 34743 - 35351 (+)
Gene ID: k141_70114_25
Type:
Location: 35595 - 36845 (-)
Gene ID: k141_70114_26
Type: TC
Location: 37441 - 38706 (+)
Gene ID: k141_70114_27
Type:
Location: 38843 - 39448 (+)
Gene ID: k141_70114_28
Type: CAZyme
Location: 39969 - 41414 (+)
Gene ID: k141_70114_29
Type: CAZyme
Location: 41868 - 44252 (-)
Gene ID: k141_70114_30
Type:
Location: 44472 - 45614 (+)
Gene ID: k141_70114_31
Type: peptidase
Location: 45611 - 46570 (+)
Gene ID: k141_70114_32
Type: TC
Location: 46618 - 47769 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_70114_24 vegetarian > vegan 1.18915 0.01794
k141_70114_27 vegetarian > vegan 1.20016 0.01794

🧭 Explore Read Mapping of CGC

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